Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   OB04_RS20685 Genome accession   NZ_CP009796
Coordinates   4001435..4002229 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain SG6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3996435..4007229
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OB04_RS20665 (OB04_04061) rocD 3997011..3998216 (-) 1206 WP_024571526.1 ornithine aminotransferase -
  OB04_RS20670 (OB04_04062) rocR 3998454..3999839 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  OB04_RS22100 - 3999821..3999973 (-) 153 Protein_4043 ATP-binding protein -
  OB04_RS22380 - 4000001..4000130 (-) 130 Protein_4044 hypothetical protein -
  OB04_RS20680 (OB04_04063) htrA 4000151..4001353 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  OB04_RS20685 (OB04_04064) vicX 4001435..4002229 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  OB04_RS20690 (OB04_04065) walI 4002251..4003093 (-) 843 WP_038429943.1 WalRK two-component regulatory system regulator WalI -
  OB04_RS20695 (OB04_04066) walH 4003080..4004447 (-) 1368 WP_003226936.1 WalRK two-component regulatory system regulator WalH -
  OB04_RS20700 (OB04_04067) walK 4004437..4006272 (-) 1836 WP_024572714.1 cell wall metabolism sensor histidine kinase WalK -
  OB04_RS20705 (OB04_04068) walR 4006280..4006987 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=113805 OB04_RS20685 WP_003226939.1 4001435..4002229(-) (vicX) [Bacillus subtilis strain SG6]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=113805 OB04_RS20685 WP_003226939.1 4001435..4002229(-) (vicX) [Bacillus subtilis strain SG6]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTTGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCCGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53