Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQL37_RS00800 | Genome accession | NZ_LS483352 |
| Coordinates | 118871..119824 (+) | Length | 317 a.a. |
| NCBI ID | WP_023610092.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NCTC12052 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 113871..124824
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL37_RS00760 (NCTC12052_00154) | - | 114698..115063 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| DQL37_RS00765 (NCTC12052_00155) | comYA | 115156..116094 (+) | 939 | WP_002993471.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL37_RS00770 (NCTC12052_00156) | comYB | 116030..117064 (+) | 1035 | WP_225793059.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL37_RS00775 (NCTC12052_00157) | comYC | 117066..117392 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL37_RS00780 (NCTC12052_00158) | comGD | 117367..117795 (+) | 429 | WP_023605232.1 | competence type IV pilus minor pilin ComGD | - |
| DQL37_RS00785 (NCTC12052_00159) | comGE | 117752..118036 (+) | 285 | WP_011284422.1 | competence type IV pilus minor pilin ComGE | - |
| DQL37_RS00790 (NCTC12052_00160) | comYF | 118029..118463 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL37_RS00795 (NCTC12052_00161) | comGG | 118447..118773 (+) | 327 | WP_002992739.1 | competence type IV pilus minor pilin ComGG | - |
| DQL37_RS00800 (NCTC12052_00162) | comYH | 118871..119824 (+) | 954 | WP_023610092.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQL37_RS00805 (NCTC12052_00163) | - | 119883..121079 (+) | 1197 | WP_002992742.1 | acetate kinase | - |
| DQL37_RS00810 | - | 121266..121574 (+) | 309 | WP_032467031.1 | hypothetical protein | - |
| DQL37_RS00815 (NCTC12052_00164) | proC | 121657..122427 (-) | 771 | WP_002992745.1 | pyrroline-5-carboxylate reductase | - |
| DQL37_RS00820 (NCTC12052_00165) | pepA | 122475..123542 (-) | 1068 | WP_002992747.1 | glutamyl aminopeptidase | - |
| DQL37_RS00830 (NCTC12052_00166) | - | 124007..124291 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| DQL37_RS00835 (NCTC12052_00167) | - | 124288..124605 (+) | 318 | WP_011285355.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35969.12 Da Isoelectric Point: 4.7866
>NTDB_id=1138025 DQL37_RS00800 WP_023610092.1 118871..119824(+) (comYH) [Streptococcus pyogenes strain NCTC12052]
MTFEKIEEAYQLLLENCQLIENVLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENVLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1138025 DQL37_RS00800 WP_023610092.1 118871..119824(+) (comYH) [Streptococcus pyogenes strain NCTC12052]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGTTCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCTTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACACTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGTTCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCTTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACACTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |
| comYH | Streptococcus mutans UA140 |
65.823 |
99.685 |
0.656 |