Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQM59_RS08435 Genome accession   NZ_LS483349
Coordinates   1664202..1664927 (-) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans strain NCTC10449     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1659202..1669927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM59_RS08400 (NCTC10449_01634) rnpM 1659373..1659669 (-) 297 WP_002263922.1 RNase P modulator RnpM -
  DQM59_RS08405 (NCTC10449_01635) nusA 1659687..1660880 (-) 1194 WP_002265156.1 transcription termination factor NusA -
  DQM59_RS08410 (NCTC10449_01636) rimP 1660916..1661407 (-) 492 WP_002280372.1 ribosome maturation factor RimP -
  DQM59_RS08420 (NCTC10449_01638) trmB 1661679..1662314 (-) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM59_RS08425 (NCTC10449_01639) ccrZ 1662324..1663106 (-) 783 WP_002273963.1 cell cycle regulator CcrZ -
  DQM59_RS08430 (NCTC10449_01640) pptB 1663165..1664199 (-) 1035 WP_002267541.1 ABC transporter permease Regulator
  DQM59_RS08435 (NCTC10449_01641) pptA 1664202..1664927 (-) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  DQM59_RS08440 (NCTC10449_01642) - 1664992..1665411 (+) 420 WP_002262609.1 HIT family protein -
  DQM59_RS08445 (NCTC10449_01643) - 1665408..1665701 (+) 294 WP_002268777.1 hypothetical protein -
  DQM59_RS08450 (NCTC10449_01644) brpA 1665871..1667091 (-) 1221 WP_002262611.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQM59_RS08455 (NCTC10449_01645) tsaE 1667422..1667865 (-) 444 WP_002280371.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM59_RS08460 (NCTC10449_01646) - 1667993..1669423 (-) 1431 WP_002265163.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=1137906 DQM59_RS08435 WP_002262608.1 1664202..1664927(-) (pptA) [Streptococcus mutans strain NCTC10449]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1137906 DQM59_RS08435 WP_002262608.1 1664202..1664927(-) (pptA) [Streptococcus mutans strain NCTC10449]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACGCCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCCTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759

Multiple sequence alignment