Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   DQM59_RS07905 Genome accession   NZ_LS483349
Coordinates   1560728..1561768 (-) Length   346 a.a.
NCBI ID   WP_002280349.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCTC10449     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1555728..1566768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM59_RS07885 (NCTC10449_01532) - 1557161..1557697 (-) 537 WP_002262043.1 VanZ family protein -
  DQM59_RS07890 (NCTC10449_01533) rlmN 1557697..1558782 (-) 1086 WP_002268849.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  DQM59_RS07895 (NCTC10449_01534) - 1558779..1559327 (-) 549 WP_002268848.1 YutD family protein -
  DQM59_RS07900 (NCTC10449_01535) - 1559324..1560655 (-) 1332 WP_002280348.1 bifunctional metallophosphatase/5'-nucleotidase -
  DQM59_RS07905 (NCTC10449_01536) sepM 1560728..1561768 (-) 1041 WP_002280349.1 S16 family serine protease SepM Regulator
  DQM59_RS07910 (NCTC10449_01537) coaD 1561746..1562246 (-) 501 WP_002264419.1 pantetheine-phosphate adenylyltransferase -
  DQM59_RS07915 (NCTC10449_01538) rsmD 1562236..1562775 (-) 540 WP_002262037.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  DQM59_RS07920 (NCTC10449_01539) - 1563358..1565133 (-) 1776 WP_002268843.1 oleate hydratase -
  DQM59_RS07925 (NCTC10449_01540) - 1565254..1565820 (-) 567 WP_002280350.1 TetR/AcrR family transcriptional regulator -
  DQM59_RS07930 (NCTC10449_01541) - 1566016..1566261 (-) 246 WP_002267028.1 hypothetical protein -
  DQM59_RS07935 (NCTC10449_01542) - 1566302..1566505 (-) 204 WP_002266333.1 hypothetical protein -

Sequence


Protein


Download         Length: 346 a.a.        Molecular weight: 37964.96 Da        Isoelectric Point: 10.1655

>NTDB_id=1137900 DQM59_RS07905 WP_002280349.1 1560728..1561768(-) (sepM) [Streptococcus mutans strain NCTC10449]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKAILKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=1137900 DQM59_RS07905 WP_002280349.1 1560728..1561768(-) (sepM) [Streptococcus mutans strain NCTC10449]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAGGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGCTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCTCATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCTTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCTGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAATTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCAAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains


Predicted by InterproScan.

(131-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.422

100

0.994


Multiple sequence alignment