Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQM48_RS01855 Genome accession   NZ_LS483348
Coordinates   331644..332369 (+) Length   241 a.a.
NCBI ID   WP_020916250.1    Uniprot ID   A0AB33AK32
Organism   Streptococcus lutetiensis strain NCTC8738     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 326644..337369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM48_RS01825 (NCTC8738_00368) - 327057..328478 (+) 1422 WP_058813649.1 NCS2 family permease -
  DQM48_RS01830 (NCTC8738_00369) tsaE 328654..329097 (+) 444 WP_058813650.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM48_RS01835 (NCTC8738_00370) - 329090..329602 (+) 513 WP_111698233.1 GNAT family N-acetyltransferase -
  DQM48_RS01840 (NCTC8738_00371) brpA 329613..330773 (+) 1161 WP_020916247.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQM48_RS01845 (NCTC8738_00372) - 330859..331164 (-) 306 WP_020916248.1 hypothetical protein -
  DQM48_RS01850 (NCTC8738_00373) - 331161..331580 (-) 420 WP_020916249.1 HIT family protein -
  DQM48_RS01855 (NCTC8738_00374) pptA 331644..332369 (+) 726 WP_020916250.1 ABC transporter ATP-binding protein Regulator
  DQM48_RS01860 (NCTC8738_00375) - 332372..333406 (+) 1035 WP_111698235.1 ABC transporter permease -
  DQM48_RS01865 (NCTC8738_00376) ccrZ 333459..334280 (+) 822 WP_043894957.1 cell cycle regulator CcrZ -
  DQM48_RS01870 (NCTC8738_00377) trmB 334280..334918 (+) 639 WP_020916253.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM48_RS01880 (NCTC8738_00378) - 335283..336314 (+) 1032 WP_111698237.1 sensor domain-containing diguanylate cyclase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26770.15 Da        Isoelectric Point: 4.6835

>NTDB_id=1137811 DQM48_RS01855 WP_020916250.1 331644..332369(+) (pptA) [Streptococcus lutetiensis strain NCTC8738]
MLKIENVTGGYINIPVLKNISFEVGDGELVGLIGLNGAGKSTTINEVIGLLTPYQGKITLDGLTLADNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLDFDQAMARAKELLKIFRLSDKLEWFPINFSKGMKQKVMIVCAFMIDPYLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAMGNLAELRQAFGQEDASLNDIYIALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1137811 DQM48_RS01855 WP_020916250.1 331644..332369(+) (pptA) [Streptococcus lutetiensis strain NCTC8738]
ATGTTAAAAATTGAAAATGTCACAGGTGGATACATTAATATCCCTGTTTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGTTGGTCGGCTTGATTGGGTTAAATGGTGCTGGGAAGTCAACGACGATTAATGAAGTTATCGGACTTTTGACACCTT
ATCAAGGAAAGATTACGCTTGACGGCTTGACTTTGGCTGATAACCAAGCAGAGTATCGCAAAAAGATTGGCTTTATTCCT
GAAACGCCAAGCTTGTATGAAGAGTTAACTTTACGTGAGCATTTAGAGACGGTTGCTATGGCTTATGACCTTGATTTTGA
TCAAGCGATGGCGCGTGCTAAGGAATTGCTAAAAATTTTCCGTCTGTCTGATAAGCTTGAATGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAAGTTATGATTGTCTGCGCCTTTATGATTGATCCTTATTTGTTTATCGTTGATGAGCCATTT
TTGGGACTAGATCCTTTGGCGATTTCTGATTTAACGGATTTGCTAGCGCAGGAAAAAGCAAAAGGCAAAGCTATTTTGAT
GTCAACACACGTGTTAGATGCTGCTGAAAAAATGTGTGATCGATTTGTGATTTTGCATCATGGTCAAGTGCGTGCAATGG
GAAATCTAGCTGAATTGCGTCAAGCTTTTGGTCAAGAAGATGCTAGTTTGAACGATATTTACATAGCTTTAACTAAAGAG
GGATAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763
  pptA Streptococcus thermophilus LMD-9

75.732

99.17

0.751

Multiple sequence alignment