Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQM50_RS02535 Genome accession   NZ_LS483347
Coordinates   471616..472341 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC8324     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 466616..477341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM50_RS02505 (NCTC8324_00502) - 466804..468264 (+) 1461 WP_023079950.1 NCS2 family permease -
  DQM50_RS02510 (NCTC8324_00503) tsaE 468418..468879 (+) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM50_RS02515 (NCTC8324_00504) - 468854..469378 (+) 525 WP_023078656.1 GNAT family N-acetyltransferase -
  DQM50_RS02520 (NCTC8324_00505) brpA 469387..470661 (+) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQM50_RS02525 (NCTC8324_00506) - 470772..471128 (-) 357 WP_009880754.1 hypothetical protein -
  DQM50_RS02530 (NCTC8324_00507) - 471125..471544 (-) 420 WP_111688410.1 HIT family protein -
  DQM50_RS02535 (NCTC8324_00508) pptA 471616..472341 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQM50_RS02540 (NCTC8324_00509) - 472344..473378 (+) 1035 WP_085613784.1 ABC transporter permease -
  DQM50_RS02545 (NCTC8324_00510) ccrZ 473443..474234 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQM50_RS02550 (NCTC8324_00511) trmB 474234..474869 (+) 636 WP_111688411.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM50_RS02560 (NCTC8324_00513) rimP 475128..475664 (+) 537 WP_172451616.1 ribosome maturation factor RimP -
  DQM50_RS02565 (NCTC8324_00514) nusA 475839..476996 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  DQM50_RS02570 (NCTC8324_00515) rnpM 477012..477308 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1137757 DQM50_RS02535 WP_002983379.1 471616..472341(+) (pptA) [Streptococcus pyogenes strain NCTC8324]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1137757 DQM50_RS02535 WP_002983379.1 471616..472341(+) (pptA) [Streptococcus pyogenes strain NCTC8324]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment