Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQM73_RS09765 Genome accession   NZ_LS483346
Coordinates   1966532..1967263 (-) Length   243 a.a.
NCBI ID   WP_032908079.1    Uniprot ID   A0A2X3VJ49
Organism   Streptococcus sanguinis strain NCTC11085     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1961532..1972263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM73_RS09735 (NCTC11085_01913) rnpM 1961698..1961994 (-) 297 WP_002893558.1 RNase P modulator RnpM -
  DQM73_RS09740 (NCTC11085_01914) nusA 1962163..1963261 (-) 1099 Protein_1851 transcription termination factor NusA -
  DQM73_RS09745 (NCTC11085_01915) rimP 1963321..1963809 (-) 489 WP_032908080.1 ribosome maturation factor RimP -
  DQM73_RS09750 (NCTC11085_01916) trmB 1964009..1964647 (-) 639 WP_002926600.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM73_RS09755 (NCTC11085_01917) ccrZ 1964644..1965438 (-) 795 WP_002893562.1 cell cycle regulator CcrZ -
  DQM73_RS09760 (NCTC11085_01918) - 1965489..1966535 (-) 1047 WP_002926602.1 ABC transporter permease -
  DQM73_RS09765 (NCTC11085_01919) pptA 1966532..1967263 (-) 732 WP_032908079.1 ABC transporter ATP-binding protein Regulator
  DQM73_RS09770 (NCTC11085_01920) - 1967332..1967742 (+) 411 WP_002901341.1 HIT family protein -
  DQM73_RS09775 (NCTC11085_01921) - 1967752..1968039 (+) 288 WP_002896907.1 hypothetical protein -
  DQM73_RS09780 (NCTC11085_01922) - 1968171..1970831 (-) 2661 WP_002926604.1 J domain-containing protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27217.75 Da        Isoelectric Point: 4.8091

>NTDB_id=1137716 DQM73_RS09765 WP_032908079.1 1966532..1967263(-) (pptA) [Streptococcus sanguinis strain NCTC11085]
MLEIKELTGGYVNIPVLKDVSFEVGNGQLVGLIGLNGAGKSTTINEIIGLLTPYKGQIQIDGLELRTNPSDYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDIEQETAFKRVDKLLEMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIQLLDDEKKKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGSLTELRAQFQMPDASLNDIYLALTEE
AVL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1137716 DQM73_RS09765 WP_032908079.1 1966532..1967263(-) (pptA) [Streptococcus sanguinis strain NCTC11085]
ATGTTAGAAATCAAAGAGCTTACGGGCGGCTATGTTAATATCCCGGTTTTAAAGGATGTCAGCTTTGAAGTGGGCAATGG
CCAGCTGGTTGGTCTGATTGGTCTCAACGGTGCGGGCAAGTCCACGACTATCAATGAGATTATCGGTCTTTTGACCCCTT
ATAAGGGGCAGATTCAGATTGATGGACTGGAGCTGCGGACTAATCCCAGTGATTACCGCAAGAAAATCGGTTTTATTCCG
GAAACGCCCAGTCTCTACGAAGAATTAACCCTGCGCGAGCACATTGAAACGGTAGCTATGGCATACGACATTGAGCAGGA
AACAGCTTTTAAACGCGTGGATAAGCTACTGGAAATGTTCCGACTCAAGGAAAAACTGGATTGGTTCCCTGTTCACTTTT
CAAAGGGGATGAAGCAAAAAGTGATGATTATCTGTGCTTTTGTAGTTGATCCCAGCCTTTTTATTGTAGATGAGCCTTTT
CTGGGTCTGGATCCGGTAGCGATTGCAGACCTTATCCAGCTCTTGGATGATGAGAAGAAGAAGGGCAAGTCCATTCTGAT
GAGCACCCATGTTCTGGACTCTGCTGAGAAGATGTGCGATAGTTTTGTAATCTTGCACAAGGGTCAAGTACGTGCCAAGG
GCAGCTTGACTGAGTTGCGGGCTCAATTTCAAATGCCGGATGCTAGTCTGAATGACATCTATCTAGCCCTGACAGAAGAG
GCAGTGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X3VJ49

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.64

98.354

0.724
  pptA Streptococcus thermophilus LMD-9

72.803

98.354

0.716

Multiple sequence alignment