Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   DQM73_RS02455 Genome accession   NZ_LS483346
Coordinates   474054..475811 (+) Length   585 a.a.
NCBI ID   WP_002925816.1    Uniprot ID   A0A2X3UYK4
Organism   Streptococcus sanguinis strain NCTC11085     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 469054..480811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM73_RS02430 (NCTC11085_00472) scrK 470104..471003 (+) 900 WP_002925822.1 fructokinase ScrK -
  DQM73_RS02435 (NCTC11085_00473) - 471050..471460 (+) 411 WP_002925821.1 peptide deformylase -
  DQM73_RS02440 (NCTC11085_00474) - 471538..471873 (+) 336 WP_002903845.1 hypothetical protein -
  DQM73_RS02445 (NCTC11085_00475) - 472048..472305 (+) 258 WP_002925819.1 hypothetical protein -
  DQM73_RS02450 (NCTC11085_00476) rcrP 472298..474064 (+) 1767 WP_002925817.1 ABC transporter ATP-binding protein Regulator
  DQM73_RS02455 (NCTC11085_00477) rcrQ 474054..475811 (+) 1758 WP_002925816.1 ABC transporter ATP-binding protein Regulator
  DQM73_RS02460 (NCTC11085_00478) - 476108..477466 (+) 1359 WP_002925811.1 cobyrinate a,c-diamide synthase -
  DQM73_RS02465 (NCTC11085_00479) cbiB 477468..478418 (+) 951 WP_002925808.1 adenosylcobinamide-phosphate synthase CbiB -
  DQM73_RS02470 (NCTC11085_00480) - 478428..479126 (+) 699 WP_002901147.1 cobalt-precorrin-8 methylmutase -
  DQM73_RS02475 (NCTC11085_00481) - 479127..479831 (+) 705 WP_002922172.1 cobalt-precorrin-8 methylmutase -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64430.44 Da        Isoelectric Point: 5.2038

>NTDB_id=1137689 DQM73_RS02455 WP_002925816.1 474054..475811(+) (rcrQ) [Streptococcus sanguinis strain NCTC11085]
MGNKKPSLFSQIRPYLKGFQLPLALAFVGAVLSNIITVYGPNKLKEITNLISDGLATSIDLKAVSEIALLLTVLYAVGAL
LNYGQSFIISTVIQYFSKRLRTAIAEKINKLPLGYFDAHSQGDTLSRVTNDVDTVGQSLNQSLGNVISASLLLVAVVLTM
FFMNWILALVTILATVLGFVFVGLIMGKSQGYFTAQQNNLAAVNGYVEEMYSGHNVVTSYNAIEQSKERFAVLNHNLYNS
IWKSQFISGMMMPLMFFTGNFAYVLVILVGAALAINGSISIGIIVAFMVYVRTFSQPLSQIAQGITVLQQAGAALVRVLE
FLAEPEMEDDQHKERQLAAVKGDVAFEDVFFGYKPDQTIIHDFSARAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ISIDGIDIKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQEHVTDEAVVAAAKAVGVHHFIMTLPQGYDTVLDDTVNL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HDELMEQNGFYADLYNSQFVEEDAS

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=1137689 DQM73_RS02455 WP_002925816.1 474054..475811(+) (rcrQ) [Streptococcus sanguinis strain NCTC11085]
ATGGGAAATAAGAAGCCTTCATTATTTAGCCAGATACGGCCTTATCTCAAAGGCTTCCAGCTTCCTCTTGCTTTGGCATT
TGTGGGAGCTGTCTTGTCAAACATTATCACGGTCTATGGGCCAAATAAATTAAAAGAAATTACCAATCTCATTTCTGATG
GTCTGGCTACCAGTATTGATTTAAAAGCTGTGTCTGAGATTGCCCTTCTGCTGACCGTGCTCTATGCAGTCGGAGCTCTG
CTCAACTACGGTCAGTCCTTTATCATCAGTACGGTTATCCAGTATTTCTCCAAGCGGCTGCGGACGGCCATTGCGGAGAA
GATTAACAAGCTGCCGCTGGGCTATTTCGATGCTCATTCTCAGGGGGATACTCTGTCGCGCGTGACCAATGACGTAGATA
CGGTCGGCCAATCCCTCAACCAGAGTCTGGGAAATGTTATCTCTGCCAGCCTGCTCTTGGTGGCTGTGGTTTTGACCATG
TTCTTCATGAACTGGATCTTGGCCTTGGTAACCATCTTGGCTACTGTATTAGGCTTTGTCTTTGTCGGTCTCATCATGGG
CAAGTCTCAGGGCTATTTCACTGCCCAGCAAAACAATCTGGCGGCTGTCAACGGCTATGTAGAGGAGATGTACTCCGGTC
ATAATGTTGTTACCAGCTATAATGCCATTGAGCAGTCTAAGGAGCGCTTTGCGGTTCTCAATCATAATCTCTATAACAGT
ATTTGGAAGTCTCAATTTATCTCTGGTATGATGATGCCGCTCATGTTCTTTACGGGGAATTTTGCTTATGTGCTGGTTAT
TTTGGTCGGTGCTGCTCTGGCGATTAATGGCTCTATTAGTATCGGAATTATCGTCGCCTTTATGGTTTATGTGCGGACCT
TTTCTCAGCCTTTGTCACAGATTGCTCAAGGTATCACCGTCTTGCAGCAGGCTGGTGCAGCACTGGTTCGTGTCCTTGAA
TTTCTGGCTGAGCCTGAGATGGAAGACGACCAGCATAAAGAGCGGCAGCTTGCTGCTGTCAAGGGAGATGTTGCCTTTGA
AGATGTCTTCTTCGGTTACAAGCCAGACCAGACGATTATTCATGATTTCTCAGCTCGGGCCAAAGCCGGACAGAAGATTG
CCATTGTCGGCCCAACGGGTGCTGGTAAGACGACCATCGTTAATCTCCTTATGAAGTTCTATGAAATTGATAAAGGGCGT
ATCAGCATTGATGGTATAGATATTAAGGATATGAAACGCTCTGAGGTTCACGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAGGGGACGATTCGGGAAAACTTGATTTATAATCAGGAGCATGTGACTGATGAAGCAGTTGTTGCTGCAG
CAAAGGCGGTCGGTGTTCATCACTTTATCATGACTCTGCCACAGGGCTATGATACGGTGCTGGATGACACGGTCAACTTA
TCGGTTGGTCAGAAGCAGCTGTTGACGATCGCTCGTGCTCTGCTCAAAGATGCGCCGCTCTTGATATTGGATGAGGCAAC
TTCGTCAGTCGATACGCGGACGGAGGAGCTCATTCAAAAGGCGATGGACAAACTCATGGAGGGCCGGACTTCCTTTGTCA
TTGCCCACCGCCTGTCTACTATCCGTAATGCGGATCTTATCTTGGTCATGCGCGATGGAAATATCATCGAGCAGGGTAAC
CACGATGAACTCATGGAGCAGAATGGCTTCTATGCGGACCTCTATAATAGTCAATTTGTAGAGGAAGATGCAAGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X3UYK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

70.034

99.829

0.699

Multiple sequence alignment