Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   DQM73_RS02450 Genome accession   NZ_LS483346
Coordinates   472298..474064 (+) Length   588 a.a.
NCBI ID   WP_002925817.1    Uniprot ID   A0A2X3VST4
Organism   Streptococcus sanguinis strain NCTC11085     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 467298..479064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM73_RS02425 (NCTC11085_00471) - 467932..469944 (+) 2013 WP_002925823.1 sucrose-specific PTS transporter subunit IIBC -
  DQM73_RS02430 (NCTC11085_00472) scrK 470104..471003 (+) 900 WP_002925822.1 fructokinase ScrK -
  DQM73_RS02435 (NCTC11085_00473) - 471050..471460 (+) 411 WP_002925821.1 peptide deformylase -
  DQM73_RS02440 (NCTC11085_00474) - 471538..471873 (+) 336 WP_002903845.1 hypothetical protein -
  DQM73_RS02445 (NCTC11085_00475) - 472048..472305 (+) 258 WP_002925819.1 hypothetical protein -
  DQM73_RS02450 (NCTC11085_00476) rcrP 472298..474064 (+) 1767 WP_002925817.1 ABC transporter ATP-binding protein Regulator
  DQM73_RS02455 (NCTC11085_00477) rcrQ 474054..475811 (+) 1758 WP_002925816.1 ABC transporter ATP-binding protein Regulator
  DQM73_RS02460 (NCTC11085_00478) - 476108..477466 (+) 1359 WP_002925811.1 cobyrinate a,c-diamide synthase -
  DQM73_RS02465 (NCTC11085_00479) cbiB 477468..478418 (+) 951 WP_002925808.1 adenosylcobinamide-phosphate synthase CbiB -

Sequence


Protein


Download         Length: 588 a.a.        Molecular weight: 65204.61 Da        Isoelectric Point: 5.1879

>NTDB_id=1137688 DQM73_RS02450 WP_002925817.1 472298..474064(+) (rcrP) [Streptococcus sanguinis strain NCTC11085]
MFKLFKRLTVREVSMIVLSVLFTFLTVYLELEVPTYISTITELLQTPGTGLADLWEPGLKMIGLSFASLLSAIVVGFFAA
RIAASFTQSLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQTLITMGLQVVTRGPIMAIWAMTKIIGKSENWLIA
VLIAVIVNILLTVVLVTLAFPKQSVAQRLVDKLNSVTRESLTGIRVVRAYNAEDYQDEKFAAANDEVTRLNLFIGRLMAM
MNPVMMGISSGLTLAIYWIGAYLIQEAGLQERLPLFSDMVVFMSYAMQIVIGFLLMGALFIVLPRTIVSAGRINEVLDLH
SSITSPEQPKAAADSKGEVVFRDVSFRYSKNSEAVIEHVSFTAQAGDTVAFIGSTGSGKSTLVNLIPRFYDVTEGEILVD
GVNVQDYQLEDLHNKVGYIPQKAVLFSGDIESNLNFGQSKESPLDEQKMWEALDLAQAKPFVQEKEKGLKAEVAQSGTNF
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKELAERTQDMTKLIVAQRISTIMDADQILVLDAGKVVGQGT
HRELLASNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=1137688 DQM73_RS02450 WP_002925817.1 472298..474064(+) (rcrP) [Streptococcus sanguinis strain NCTC11085]
ATGTTTAAGTTATTTAAACGGCTGACGGTAAGGGAAGTGAGCATGATTGTTCTCAGTGTGCTCTTCACCTTCCTAACGGT
ATATCTGGAATTAGAAGTTCCAACCTATATTTCGACGATTACAGAGTTGCTGCAAACACCAGGGACTGGTTTGGCAGATT
TGTGGGAGCCAGGTCTGAAAATGATCGGCCTGTCTTTTGCTAGCTTGCTGTCAGCTATTGTGGTTGGCTTTTTTGCCGCT
CGTATAGCAGCCAGCTTTACCCAGAGCTTGCGGAGCGATATTTTCAACCGTGTGCTAGACTATTCGCAGACGGAGATTAA
GAAATTTTCAATCCCTAGTCTGCTGACTCGGACGACAAATGATATTACCCAGGTACAGACCTTAATTACCATGGGGCTTC
AGGTGGTGACCAGGGGACCGATTATGGCGATTTGGGCCATGACCAAGATTATTGGCAAGTCCGAGAACTGGCTGATAGCA
GTTCTTATTGCTGTTATAGTCAATATCCTGCTGACAGTAGTTTTGGTGACATTGGCCTTTCCCAAGCAGTCAGTGGCGCA
ACGCTTGGTCGATAAGCTAAACAGTGTCACTAGAGAGAGTCTGACTGGGATTCGCGTGGTCCGGGCTTACAATGCTGAGG
ATTATCAGGATGAGAAATTTGCGGCGGCCAATGATGAAGTAACCCGGCTCAATCTTTTCATCGGTCGTCTGATGGCCATG
ATGAATCCAGTTATGATGGGGATTTCCAGCGGATTGACACTGGCTATTTACTGGATTGGTGCTTATTTGATCCAGGAGGC
TGGGCTGCAGGAGCGTCTCCCACTCTTCAGTGATATGGTCGTCTTTATGTCCTATGCTATGCAGATTGTGATTGGATTCT
TGCTCATGGGTGCCCTCTTCATCGTCCTGCCTCGGACCATTGTATCCGCTGGCCGGATTAATGAAGTACTGGACCTGCAT
TCTTCTATCACCAGTCCGGAACAGCCTAAGGCAGCAGCGGATAGCAAGGGAGAGGTGGTCTTTCGAGACGTGTCCTTCCG
CTATTCCAAGAATTCAGAAGCGGTCATTGAGCATGTCAGCTTTACAGCGCAGGCTGGTGATACCGTGGCCTTTATCGGTT
CAACTGGTTCAGGGAAATCCACGCTAGTCAATCTCATTCCTCGTTTCTACGATGTAACTGAAGGAGAGATTCTGGTAGAT
GGTGTCAATGTTCAGGATTACCAGCTGGAAGACCTGCATAATAAGGTCGGCTACATCCCGCAAAAGGCGGTGCTTTTCTC
TGGCGATATCGAGAGCAATCTGAACTTCGGTCAAAGCAAAGAAAGCCCGCTGGATGAGCAGAAAATGTGGGAGGCTCTTG
ACCTTGCACAGGCTAAGCCCTTTGTCCAAGAGAAGGAAAAGGGGCTGAAAGCTGAAGTGGCTCAAAGCGGAACCAACTTC
TCTGGTGGCCAGCGTCAGCGCTTGGCCATTGCCAGAGCCTTGGCTCGTAAGCCAGAAATCCTCATCTTTGACGACTCCTT
CTCAGCGCTAGACTATAAGACAGACCGCATTTTGCGCAAGGAACTGGCTGAGCGGACGCAGGATATGACCAAGCTAATCG
TGGCGCAGCGGATTTCTACTATCATGGATGCGGATCAAATCTTGGTCTTGGATGCTGGTAAGGTGGTCGGTCAAGGTACC
CACCGAGAACTTTTGGCCAGCAACGAAGTCTATCAAGAAATTGCCTACTCACAATTATCCAAGGAGGAATTAGAAAATGG
GAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2X3VST4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.333

100

0.697


Multiple sequence alignment