Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | DQL23_RS10060 | Genome accession | NZ_LS483341 |
| Coordinates | 2052197..2054626 (-) | Length | 809 a.a. |
| NCBI ID | WP_060554212.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain NCTC7865 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2047197..2059626
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL23_RS10035 (NCTC7865_02026) | dusB | 2047323..2048300 (+) | 978 | WP_045634802.1 | tRNA dihydrouridine synthase DusB | - |
| DQL23_RS10040 (NCTC7865_02027) | - | 2048340..2049014 (-) | 675 | WP_060554208.1 | hypothetical protein | - |
| DQL23_RS10045 (NCTC7865_02028) | - | 2049251..2050039 (-) | 789 | WP_060554209.1 | NUDIX domain-containing protein | - |
| DQL23_RS10050 (NCTC7865_02029) | pnuC | 2050083..2050898 (-) | 816 | WP_060554210.1 | nicotinamide riboside transporter PnuC | - |
| DQL23_RS10055 (NCTC7865_02030) | - | 2050920..2051978 (-) | 1059 | WP_060554211.1 | AAA family ATPase | - |
| DQL23_RS10060 (NCTC7865_02031) | clpC | 2052197..2054626 (-) | 2430 | WP_060554212.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| DQL23_RS10065 (NCTC7865_02032) | - | 2054633..2055091 (-) | 459 | WP_060554213.1 | CtsR family transcriptional regulator | - |
| DQL23_RS10070 (NCTC7865_02033) | - | 2055410..2055760 (+) | 351 | WP_045773017.1 | hypothetical protein | - |
| DQL23_RS10075 (NCTC7865_02034) | tsf | 2055868..2056911 (-) | 1044 | WP_060554214.1 | translation elongation factor Ts | - |
| DQL23_RS10080 (NCTC7865_02035) | rpsB | 2056990..2057772 (-) | 783 | WP_008809924.1 | 30S ribosomal protein S2 | - |
| DQL23_RS10085 (NCTC7865_02035) | - | 2058057..2058127 (+) | 71 | WP_008809924.1 | tRNA-Cys | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 90178.08 Da Isoelectric Point: 6.5945
>NTDB_id=1137507 DQL23_RS10060 WP_060554212.1 2052197..2054626(-) (clpC) [Streptococcus gordonii strain NCTC7865]
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGRFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRVLEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPGVADSIAILKGLKENYEAHHKVMITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLSRLIEKENQPLLSNLRVEEADIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMIKPLVASLAEKNIELKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIV
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGRFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRVLEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPGVADSIAILKGLKENYEAHHKVMITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLSRLIEKENQPLLSNLRVEEADIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMIKPLVASLAEKNIELKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=1137507 DQL23_RS10060 WP_060554212.1 2052197..2054626(-) (clpC) [Streptococcus gordonii strain NCTC7865]
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGCCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTATTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTAGTAGGAAAGTCTTATCAGAAGGAAGGGCGATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCAATAGCAGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
TATCTTATACGCTATCATCAGCGACAGAGGAACCCTAGCAACTCGTGTTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGAAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAACTAGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCACACGAACTAGCCAAAATGCGGGTTCTAGA
GCTTGATTTAATGAATGTAGTCGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGTATGAACAATATCATCGATGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTCGCTAAGATTAGTATTGAAGAACCAGGTGTGGCTGACA
GCATTGCTATCCTTAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAAGGTAATGATTACAGATCAAGCCATTGAAACA
GCTGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCAGATTCAGCAATTGATCTATTAGATGAAGCGAGTGC
TACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAACTTAGTCGCTTGATCGAGAAAGAAAATCAACCTCTGTTAAGTAATTTAAGAGTAGAGGAAGCAGATATTCTG
ACAACCCTAAGTCGTCTGTCTGGTATTCCAGTTCAAAAATTGACCCAGACAGATGCTAAGAAGTATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGTCAAGATGAAGCTATCTCAGCTATTAGTCGTGCTATCCGTCGTAACCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGTCCAACTGGGGTTGGTAAGACCGAGTTGGCTAAGGCT
CTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCAGCCAG
TCGTCTCAACGGAGCGCCTCCAGGTTATGTCGGCTATGAAGAAGGGGGCGAATTGACAGAGAAAGTTCGCAACAGACCTT
ATTCTGTTCTCTTATTTGACGAAGTTGAAAAAGCTCATCCGGATATTTTCAATGTCCTTCTGCAGGTTCTAGATGATGGT
GTATTGACTGATAGTAAGGGAAGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGTAACCTAGGCGCGACCAG
TCTGCGTGATGATAAGACAGTTGGCTTTGGGGCTCGTGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGAATTGATGAAAAAGTGGTCTTCCATAGCTTGTCTGCTGAC
CATATGCAGGAGGTTGTCAAAGTGATGATTAAGCCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCGAACTAAAATTCCA
AGCCAGTGCATTGAAACTACTAGCTAAAGAAGGCTATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTAACTGGTGATTTACAAGCTGGTCAGACCTTGAAAGTGGGGGTTAAG
GCAGGCCAGTTGAAGTTTGATATAGTCTAA
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGCCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTATTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTAGTAGGAAAGTCTTATCAGAAGGAAGGGCGATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCAATAGCAGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
TATCTTATACGCTATCATCAGCGACAGAGGAACCCTAGCAACTCGTGTTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGAAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAACTAGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCACACGAACTAGCCAAAATGCGGGTTCTAGA
GCTTGATTTAATGAATGTAGTCGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGTATGAACAATATCATCGATGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTCGCTAAGATTAGTATTGAAGAACCAGGTGTGGCTGACA
GCATTGCTATCCTTAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAAGGTAATGATTACAGATCAAGCCATTGAAACA
GCTGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCAGATTCAGCAATTGATCTATTAGATGAAGCGAGTGC
TACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAACTTAGTCGCTTGATCGAGAAAGAAAATCAACCTCTGTTAAGTAATTTAAGAGTAGAGGAAGCAGATATTCTG
ACAACCCTAAGTCGTCTGTCTGGTATTCCAGTTCAAAAATTGACCCAGACAGATGCTAAGAAGTATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGTCAAGATGAAGCTATCTCAGCTATTAGTCGTGCTATCCGTCGTAACCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGTCCAACTGGGGTTGGTAAGACCGAGTTGGCTAAGGCT
CTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCAGCCAG
TCGTCTCAACGGAGCGCCTCCAGGTTATGTCGGCTATGAAGAAGGGGGCGAATTGACAGAGAAAGTTCGCAACAGACCTT
ATTCTGTTCTCTTATTTGACGAAGTTGAAAAAGCTCATCCGGATATTTTCAATGTCCTTCTGCAGGTTCTAGATGATGGT
GTATTGACTGATAGTAAGGGAAGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGTAACCTAGGCGCGACCAG
TCTGCGTGATGATAAGACAGTTGGCTTTGGGGCTCGTGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGAATTGATGAAAAAGTGGTCTTCCATAGCTTGTCTGCTGAC
CATATGCAGGAGGTTGTCAAAGTGATGATTAAGCCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCGAACTAAAATTCCA
AGCCAGTGCATTGAAACTACTAGCTAAAGAAGGCTATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTAACTGGTGATTTACAAGCTGGTCAGACCTTGAAAGTGGGGGTTAAG
GCAGGCCAGTTGAAGTTTGATATAGTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
77.901 |
100 |
0.78 |
| clpC | Streptococcus pneumoniae D39 |
77.901 |
100 |
0.78 |
| clpC | Streptococcus pneumoniae TIGR4 |
77.901 |
100 |
0.78 |
| clpC | Streptococcus mutans UA159 |
67.541 |
99.011 |
0.669 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.093 |
100 |
0.665 |
| clpC | Streptococcus thermophilus LMD-9 |
65.971 |
100 |
0.664 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.507 |
100 |
0.502 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.072 |
100 |
0.464 |
| clpE | Streptococcus pneumoniae Rx1 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus mutans UA159 |
47.749 |
76.885 |
0.367 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.461 |
81.459 |
0.362 |