Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OB04_RS09730 Genome accession   NZ_CP009796
Coordinates   1890491..1891108 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SG6     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1885491..1896108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OB04_RS09700 (OB04_01904) yndJ 1885821..1887461 (+) 1641 WP_038429036.1 YndJ family protein -
  OB04_RS09705 (OB04_01905) - 1887539..1887853 (+) 315 WP_003245621.1 hypothetical protein -
  OB04_RS09710 (OB04_01906) pghL 1888078..1888836 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  OB04_RS09715 (OB04_01907) - 1888863..1889312 (-) 450 WP_003245454.1 YndM family protein -
  OB04_RS09720 (OB04_01908) fosB 1889520..1889954 (+) 435 WP_038429037.1 metallothiol transferase FosB -
  OB04_RS22550 - 1889863..1890139 (+) 277 Protein_1873 hypothetical protein -
  OB04_RS09730 (OB04_01909) dinR/lexA 1890491..1891108 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  OB04_RS09735 (OB04_01910) yneA 1891258..1891575 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  OB04_RS09740 (OB04_01911) dinL 1891594..1892247 (+) 654 WP_015714011.1 recombinase family protein -
  OB04_RS09745 (OB04_01912) ynzC 1892311..1892544 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  OB04_RS09750 (OB04_01913) recP/tkt 1892713..1894716 (+) 2004 WP_014476936.1 transketolase Machinery gene
  OB04_RS09755 (OB04_01914) sirA 1894869..1895315 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  OB04_RS09760 (OB04_01915) yneF 1895401..1895619 (+) 219 WP_003221221.1 YneF family protein -
  OB04_RS09765 (OB04_01916) ynzD 1895693..1895866 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=113735 OB04_RS09730 WP_003238209.1 1890491..1891108(-) (dinR/lexA) [Bacillus subtilis strain SG6]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=113735 OB04_RS09730 WP_003238209.1 1890491..1891108(-) (dinR/lexA) [Bacillus subtilis strain SG6]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GACTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment