Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQL08_RS07195 Genome accession   NZ_LS483336
Coordinates   1400807..1401532 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC12046     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1395807..1406532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL08_RS07160 (NCTC12046_01428) rnpM 1395841..1396137 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQL08_RS07165 (NCTC12046_01429) nusA 1396153..1397310 (-) 1158 WP_023611711.1 transcription termination factor NusA -
  DQL08_RS07170 (NCTC12046_01430) rimP 1397485..1398021 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQL08_RS07180 (NCTC12046_01432) trmB 1398280..1398915 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL08_RS07185 (NCTC12046_01433) ccrZ 1398915..1399706 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQL08_RS07190 (NCTC12046_01434) - 1399770..1400804 (-) 1035 WP_002994331.1 ABC transporter permease -
  DQL08_RS07195 (NCTC12046_01435) pptA 1400807..1401532 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQL08_RS07200 (NCTC12046_01436) - 1401604..1402023 (+) 420 WP_002983376.1 HIT family protein -
  DQL08_RS07205 (NCTC12046_01437) - 1402020..1402376 (+) 357 WP_002983373.1 hypothetical protein -
  DQL08_RS07210 (NCTC12046_01438) brpA 1402487..1403770 (-) 1284 WP_032467221.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL08_RS07215 (NCTC12046_01439) - 1403779..1404303 (-) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  DQL08_RS07220 (NCTC12046_01440) tsaE 1404278..1404739 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL08_RS07225 (NCTC12046_01441) - 1404893..1406353 (-) 1461 WP_002983366.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1137209 DQL08_RS07195 WP_002983379.1 1400807..1401532(-) (pptA) [Streptococcus pyogenes strain NCTC12046]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1137209 DQL08_RS07195 WP_002983379.1 1400807..1401532(-) (pptA) [Streptococcus pyogenes strain NCTC12046]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCTTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTTGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment