Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQL44_RS07980 Genome accession   NZ_LS483335
Coordinates   1497244..1497969 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC8332     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1492244..1502969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL44_RS07945 (NCTC8332_01601) rnpM 1492278..1492574 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQL44_RS07950 (NCTC8332_01602) nusA 1492590..1493747 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  DQL44_RS07955 (NCTC8332_01603) rimP 1493922..1494458 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQL44_RS07965 (NCTC8332_01605) trmB 1494717..1495352 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL44_RS07970 (NCTC8332_01606) ccrZ 1495352..1496143 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQL44_RS07975 (NCTC8332_01607) - 1496207..1497241 (-) 1035 WP_002983381.1 ABC transporter permease -
  DQL44_RS07980 (NCTC8332_01608) pptA 1497244..1497969 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQL44_RS07985 (NCTC8332_01609) - 1498041..1498460 (+) 420 WP_002983376.1 HIT family protein -
  DQL44_RS07990 (NCTC8332_01610) - 1498457..1498813 (+) 357 WP_111677437.1 chemotaxis protein -
  DQL44_RS07995 (NCTC8332_01611) brpA 1498924..1500207 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL44_RS08000 (NCTC8332_01612) - 1500216..1500740 (-) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  DQL44_RS08005 (NCTC8332_01613) tsaE 1500715..1501176 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL44_RS08010 (NCTC8332_01614) - 1501330..1502790 (-) 1461 WP_011106621.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1137154 DQL44_RS07980 WP_002983379.1 1497244..1497969(-) (pptA) [Streptococcus pyogenes strain NCTC8332]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1137154 DQL44_RS07980 WP_002983379.1 1497244..1497969(-) (pptA) [Streptococcus pyogenes strain NCTC8332]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCTTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment