Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQL28_RS09350 Genome accession   NZ_LS483334
Coordinates   1850230..1851006 (+) Length   258 a.a.
NCBI ID   WP_002994930.1    Uniprot ID   A0A0H2UWR5
Organism   Streptococcus pyogenes strain NCTC12050     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1845230..1856006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL28_RS09330 (NCTC12050_01841) - 1847016..1847832 (-) 817 Protein_1746 IS30 family transposase -
  DQL28_RS09340 (NCTC12050_01844) rlmH 1848227..1848706 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQL28_RS09345 (NCTC12050_01845) htrA 1848918..1850141 (+) 1224 WP_111676915.1 S1C family serine protease Regulator
  DQL28_RS09350 (NCTC12050_01846) spo0J 1850230..1851006 (+) 777 WP_002994930.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29056.87 Da        Isoelectric Point: 10.3100

>NTDB_id=1137106 DQL28_RS09350 WP_002994930.1 1850230..1851006(+) (spo0J) [Streptococcus pyogenes strain NCTC12050]
MTKELLIDLPIEDIITNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1137106 DQL28_RS09350 WP_002994930.1 1850230..1851006(+) (spo0J) [Streptococcus pyogenes strain NCTC12050]
ATGACAAAAGAATTATTGATAGACTTACCAATTGAAGATATTATTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWR5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585


Multiple sequence alignment