Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DQL30_RS09075 Genome accession   NZ_LS483333
Coordinates   1792026..1792802 (+) Length   258 a.a.
NCBI ID   WP_168389347.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12048     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1787026..1797802
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL30_RS09055 (NCTC12048_01797) - 1788854..1789628 (-) 775 Protein_1686 IS30 family transposase -
  DQL30_RS09065 (NCTC12048_01800) rlmH 1790023..1790502 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQL30_RS09070 (NCTC12048_01801) htrA 1790714..1791937 (+) 1224 WP_003054444.1 S1C family serine protease Regulator
  DQL30_RS09075 (NCTC12048_01802) spo0J 1792026..1792802 (+) 777 WP_168389347.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29072.87 Da        Isoelectric Point: 10.3100

>NTDB_id=1137051 DQL30_RS09075 WP_168389347.1 1792026..1792802(+) (spo0J) [Streptococcus pyogenes strain NCTC12048]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPTPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1137051 DQL30_RS09075 WP_168389347.1 1792026..1792802(+) (spo0J) [Streptococcus pyogenes strain NCTC12048]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAACACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-197)

ParB/Sulfiredoxin domain (ParB_N)

(9-96)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585

Multiple sequence alignment