Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQL30_RS02335 Genome accession   NZ_LS483333
Coordinates   432136..432861 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC12048     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 427136..437861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL30_RS02305 (NCTC12048_00457) - 427315..428775 (+) 1461 WP_002988645.1 NCS2 family permease -
  DQL30_RS02310 (NCTC12048_00458) tsaE 428929..429390 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL30_RS02315 (NCTC12048_00459) - 429365..429889 (+) 525 WP_063811834.1 GNAT family N-acetyltransferase -
  DQL30_RS02320 (NCTC12048_00460) brpA 429898..431181 (+) 1284 WP_111713633.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL30_RS02325 (NCTC12048_00461) - 431292..431648 (-) 357 WP_014407784.1 hypothetical protein -
  DQL30_RS02330 (NCTC12048_00462) - 431645..432064 (-) 420 WP_002983376.1 HIT family protein -
  DQL30_RS02335 (NCTC12048_00463) pptA 432136..432861 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQL30_RS02340 (NCTC12048_00464) - 432864..433898 (+) 1035 WP_002994331.1 ABC transporter permease -
  DQL30_RS02345 (NCTC12048_00465) ccrZ 433962..434753 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQL30_RS02350 (NCTC12048_00466) trmB 434753..435388 (+) 636 WP_111684630.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL30_RS02360 (NCTC12048_00468) rimP 435647..436183 (+) 537 WP_172449889.1 ribosome maturation factor RimP -
  DQL30_RS02365 (NCTC12048_00469) nusA 436358..437515 (+) 1158 WP_111713634.1 transcription termination factor NusA -
  DQL30_RS02370 (NCTC12048_00470) rnpM 437531..437827 (+) 297 WP_111713635.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1137019 DQL30_RS02335 WP_002983379.1 432136..432861(+) (pptA) [Streptococcus pyogenes strain NCTC12048]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1137019 DQL30_RS02335 WP_002983379.1 432136..432861(+) (pptA) [Streptococcus pyogenes strain NCTC12048]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment