Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQL25_RS08990 Genome accession   NZ_LS483330
Coordinates   1765687..1766400 (+) Length   237 a.a.
NCBI ID   WP_111703687.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8328     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1760687..1771400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL25_RS08980 (NCTC8328_01784) treC 1761757..1763385 (-) 1629 WP_111703683.1 alpha,alpha-phosphotrehalase -
  DQL25_RS08985 (NCTC8328_01785) treP 1763452..1765476 (-) 2025 WP_111703685.1 PTS system trehalose-specific EIIBC component -
  DQL25_RS08990 (NCTC8328_01786) treR 1765687..1766400 (+) 714 WP_111703687.1 trehalose operon repressor Regulator
  DQL25_RS09000 (NCTC8328_01787) - 1766677..1767036 (-) 360 Protein_1680 winged helix-turn-helix transcriptional regulator -
  DQL25_RS09005 (NCTC8328_01788) - 1767200..1768057 (+) 858 WP_111703689.1 VOC family protein -
  DQL25_RS09010 (NCTC8328_01789) yaaA 1768099..1768830 (+) 732 WP_111703691.1 peroxide stress protein YaaA -
  DQL25_RS09015 (NCTC8328_01790) nrdG 1769004..1769618 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  DQL25_RS09020 (NCTC8328_01791) - 1769618..1770127 (-) 510 WP_111703693.1 GNAT family N-acetyltransferase -
  DQL25_RS09025 (NCTC8328_01792) - 1770136..1771071 (-) 936 WP_111685297.1 Gfo/Idh/MocA family protein -
  DQL25_RS09630 (NCTC8328_01793) - 1771100..1771246 (-) 147 WP_011106921.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27619.81 Da        Isoelectric Point: 9.7515

>NTDB_id=1136877 DQL25_RS08990 WP_111703687.1 1765687..1766400(+) (treR) [Streptococcus pyogenes strain NCTC8328]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLNLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1136877 DQL25_RS08990 WP_111703687.1 1765687..1766400(+) (treR) [Streptococcus pyogenes strain NCTC8328]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGATTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTAACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671

Multiple sequence alignment