Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL25_RS07210 Genome accession   NZ_LS483330
Coordinates   1410602..1411411 (-) Length   269 a.a.
NCBI ID   WP_023612763.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8328     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1405602..1416411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL25_RS07200 (NCTC8328_01442) smc 1405927..1409466 (-) 3540 WP_111703429.1 chromosome segregation protein SMC -
  DQL25_RS07205 (NCTC8328_01443) rnc 1409467..1410159 (-) 693 WP_002990670.1 ribonuclease III -
  DQL25_RS07210 (NCTC8328_01444) vicX 1410602..1411411 (-) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  DQL25_RS07215 (NCTC8328_01445) vicK 1411415..1412767 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL25_RS07220 (NCTC8328_01446) vicR 1412760..1413470 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DQL25_RS07225 (NCTC8328_01447) - 1413632..1414666 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQL25_RS07230 (NCTC8328_01448) - 1414722..1415969 (-) 1248 WP_011284594.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=1136868 DQL25_RS07210 WP_023612763.1 1410602..1411411(-) (vicX) [Streptococcus pyogenes strain NCTC8328]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1136868 DQL25_RS07210 WP_023612763.1 1410602..1411411(-) (vicX) [Streptococcus pyogenes strain NCTC8328]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment