Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   DQL25_RS03515 Genome accession   NZ_LS483330
Coordinates   659328..660365 (+) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes strain NCTC8328     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 654328..665365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL25_RS03490 (NCTC8328_00692) - 654592..655923 (+) 1332 WP_111703204.1 dipeptidase -
  DQL25_RS03495 (NCTC8328_00693) arcC 655943..656893 (+) 951 WP_009880962.1 carbamate kinase -
  DQL25_RS03500 (NCTC8328_00694) asnA 657206..658198 (+) 993 WP_023611792.1 aspartate--ammonia ligase -
  DQL25_RS03505 (NCTC8328_00695) rsmD 658321..658860 (+) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  DQL25_RS03510 (NCTC8328_00696) coaD 658850..659341 (+) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  DQL25_RS03515 (NCTC8328_00697) sepM 659328..660365 (+) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  DQL25_RS03520 (NCTC8328_00698) - 660770..661747 (+) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  DQL25_RS03525 (NCTC8328_00699) - 662195..662815 (+) 621 WP_002992791.1 YutD family protein -
  DQL25_RS03530 (NCTC8328_00700) rlmN 662819..663898 (+) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  DQL25_RS03535 (NCTC8328_00701) - 663980..664606 (-) 627 WP_002983834.1 prepilin peptidase -
  DQL25_RS03540 (NCTC8328_00702) - 664834..665361 (+) 528 WP_002983837.1 Dps family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=1136855 DQL25_RS03515 WP_010922499.1 659328..660365(+) (sepM) [Streptococcus pyogenes strain NCTC8328]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1136855 DQL25_RS03515 WP_010922499.1 659328..660365(+) (sepM) [Streptococcus pyogenes strain NCTC8328]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment