Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQL25_RS02400 Genome accession   NZ_LS483330
Coordinates   456021..456746 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC8328     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 451021..461746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL25_RS02370 (NCTC8328_00471) - 451200..452660 (+) 1461 WP_002983366.1 NCS2 family permease -
  DQL25_RS02375 (NCTC8328_00472) tsaE 452814..453275 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL25_RS02380 (NCTC8328_00473) - 453250..453774 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  DQL25_RS02385 (NCTC8328_00474) brpA 453783..455066 (+) 1284 WP_030126322.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL25_RS02390 (NCTC8328_00475) - 455177..455533 (-) 357 WP_009880754.1 hypothetical protein -
  DQL25_RS02395 (NCTC8328_00476) - 455530..455949 (-) 420 WP_002983376.1 HIT family protein -
  DQL25_RS02400 (NCTC8328_00477) pptA 456021..456746 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQL25_RS02405 (NCTC8328_00478) - 456749..457783 (+) 1035 WP_002988663.1 ABC transporter permease -
  DQL25_RS02410 (NCTC8328_00479) ccrZ 457847..458638 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQL25_RS02415 (NCTC8328_00480) trmB 458638..459273 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL25_RS02425 (NCTC8328_00482) rimP 459532..460068 (+) 537 WP_172449953.1 ribosome maturation factor RimP -
  DQL25_RS02430 (NCTC8328_00483) nusA 460243..461400 (+) 1158 WP_111703156.1 transcription termination factor NusA -
  DQL25_RS02435 (NCTC8328_00484) rnpM 461416..461712 (+) 297 WP_111703157.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1136848 DQL25_RS02400 WP_002983379.1 456021..456746(+) (pptA) [Streptococcus pyogenes strain NCTC8328]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1136848 DQL25_RS02400 WP_002983379.1 456021..456746(+) (pptA) [Streptococcus pyogenes strain NCTC8328]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGATTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment