Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQL27_RS06895 Genome accession   NZ_LS483329
Coordinates   1342379..1343104 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC12058     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1337379..1348104
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL27_RS06860 (NCTC12058_01366) rnpM 1337413..1337709 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQL27_RS06865 (NCTC12058_01367) nusA 1337725..1338882 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  DQL27_RS06870 (NCTC12058_01368) rimP 1339057..1339593 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQL27_RS06880 (NCTC12058_01370) trmB 1339852..1340487 (-) 636 WP_111711459.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL27_RS06885 (NCTC12058_01371) ccrZ 1340487..1341278 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQL27_RS06890 (NCTC12058_01372) - 1341342..1342376 (-) 1035 WP_031577431.1 ABC transporter permease -
  DQL27_RS06895 (NCTC12058_01373) pptA 1342379..1343104 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQL27_RS06900 (NCTC12058_01374) - 1343176..1343595 (+) 420 WP_002983376.1 HIT family protein -
  DQL27_RS06905 (NCTC12058_01375) - 1343592..1343948 (+) 357 WP_031488470.1 hypothetical protein -
  DQL27_RS06910 (NCTC12058_01376) brpA 1344059..1345342 (-) 1284 WP_031488469.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL27_RS06915 (NCTC12058_01377) - 1345351..1345875 (-) 525 WP_031488468.1 GNAT family N-acetyltransferase -
  DQL27_RS06920 (NCTC12058_01378) tsaE 1345850..1346311 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL27_RS06925 (NCTC12058_01379) - 1346465..1347925 (-) 1461 WP_031488467.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1136816 DQL27_RS06895 WP_002983379.1 1342379..1343104(-) (pptA) [Streptococcus pyogenes strain NCTC12058]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1136816 DQL27_RS06895 WP_002983379.1 1342379..1343104(-) (pptA) [Streptococcus pyogenes strain NCTC12058]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment