Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   DQL59_RS09190 Genome accession   NZ_LS483326
Coordinates   56269..56364 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12045     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 51269..61364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL59_RS00330 (NCTC12045_00065) - 52117..53229 (+) 1113 WP_032464126.1 DUF262 domain-containing protein -
  DQL59_RS00335 (NCTC12045_00066) - 53233..53841 (+) 609 WP_032464127.1 hypothetical protein -
  DQL59_RS00340 (NCTC12045_00067) purB 53851..55143 (+) 1293 WP_032464128.1 adenylosuccinate lyase -
  DQL59_RS00345 (NCTC12045_00068) comR 55274..56185 (+) 912 WP_002986681.1 transcriptional regulator Rgg4/ComR Regulator
  DQL59_RS09190 (NCTC12045_00069) comS 56269..56364 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  DQL59_RS00350 (NCTC12045_00070) ruvB 56411..57409 (+) 999 WP_111680962.1 Holliday junction branch migration DNA helicase RuvB -
  DQL59_RS00355 (NCTC12045_00071) - 57547..57984 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  DQL59_RS00360 (NCTC12045_00072) - 58007..58408 (+) 402 WP_002986671.1 MORN repeat-containing protein -
  DQL59_RS00365 (NCTC12045_00073) - 58405..60180 (+) 1776 WP_111680963.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=1136658 DQL59_RS09190 WP_198462994.1 56269..56364(+) (comS) [Streptococcus pyogenes strain NCTC12045]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=1136658 DQL59_RS09190 WP_198462994.1 56269..56364(+) (comS) [Streptococcus pyogenes strain NCTC12045]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment