Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQL59_RS08350 Genome accession   NZ_LS483326
Coordinates   1660025..1660738 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain NCTC12045     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1655025..1665738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL59_RS08340 (NCTC12045_01641) treC 1656094..1657722 (-) 1629 WP_111681399.1 alpha,alpha-phosphotrehalase -
  DQL59_RS08345 (NCTC12045_01642) treP 1657790..1659814 (-) 2025 WP_111681400.1 PTS system trehalose-specific EIIBC component -
  DQL59_RS08350 (NCTC12045_01643) treR 1660025..1660738 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  DQL59_RS08360 (NCTC12045_01644) - 1661018..1661349 (-) 332 Protein_1540 winged helix-turn-helix transcriptional regulator -
  DQL59_RS08365 (NCTC12045_01646) - 1661536..1662393 (+) 858 Protein_1541 VOC family protein -
  DQL59_RS08370 (NCTC12045_01647) yaaA 1662435..1663166 (+) 732 WP_030126186.1 peroxide stress protein YaaA -
  DQL59_RS08375 (NCTC12045_01648) nrdG 1663340..1663954 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  DQL59_RS08380 (NCTC12045_01649) - 1663954..1664462 (-) 509 Protein_1544 GNAT family N-acetyltransferase -
  DQL59_RS08385 (NCTC12045_01650) - 1664471..1665406 (-) 936 WP_111681401.1 Gfo/Idh/MocA family protein -
  DQL59_RS08950 (NCTC12045_01651) - 1665435..1665581 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1136653 DQL59_RS08350 WP_002982243.1 1660025..1660738(+) (treR) [Streptococcus pyogenes strain NCTC12045]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1136653 DQL59_RS08350 WP_002982243.1 1660025..1660738(+) (treR) [Streptococcus pyogenes strain NCTC12045]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment