Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQL59_RS05880 Genome accession   NZ_LS483326
Coordinates   1145781..1146506 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC12045     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1140781..1151506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL59_RS05845 (NCTC12045_01160) rnpM 1140815..1141111 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQL59_RS05850 (NCTC12045_01161) nusA 1141127..1142284 (-) 1158 WP_111681243.1 transcription termination factor NusA -
  DQL59_RS05855 (NCTC12045_01162) rimP 1142459..1142995 (-) 537 WP_002983483.1 ribosome maturation factor RimP -
  DQL59_RS05865 (NCTC12045_01164) trmB 1143254..1143889 (-) 636 WP_111681244.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL59_RS05870 (NCTC12045_01165) ccrZ 1143889..1144680 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQL59_RS05875 (NCTC12045_01166) - 1144744..1145778 (-) 1035 WP_111681245.1 ABC transporter permease -
  DQL59_RS05880 (NCTC12045_01167) pptA 1145781..1146506 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQL59_RS05885 (NCTC12045_01168) - 1146578..1146997 (+) 420 WP_002983376.1 HIT family protein -
  DQL59_RS05890 (NCTC12045_01169) - 1146994..1147350 (+) 357 WP_031488470.1 hypothetical protein -
  DQL59_RS05895 (NCTC12045_01170) brpA 1147461..1148744 (-) 1284 WP_031488469.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL59_RS05900 (NCTC12045_01171) - 1148753..1149277 (-) 525 WP_111681246.1 GNAT family N-acetyltransferase -
  DQL59_RS05905 (NCTC12045_01172) tsaE 1149252..1149713 (-) 462 WP_030126320.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL59_RS05910 (NCTC12045_01173) - 1149867..1151327 (-) 1461 WP_012560892.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1136631 DQL59_RS05880 WP_002983379.1 1145781..1146506(-) (pptA) [Streptococcus pyogenes strain NCTC12045]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1136631 DQL59_RS05880 WP_002983379.1 1145781..1146506(-) (pptA) [Streptococcus pyogenes strain NCTC12045]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment