Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQL35_RS02285 Genome accession   NZ_LS483325
Coordinates   455061..455786 (+) Length   241 a.a.
NCBI ID   WP_111677796.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC7022     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 450061..460786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL35_RS02255 (NCTC7022_00449) tsaE 450696..451139 (+) 444 WP_111677792.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL35_RS02260 (NCTC7022_00450) - 451132..451659 (+) 528 WP_111677793.1 GNAT family N-acetyltransferase -
  DQL35_RS02265 (NCTC7022_00451) brpA 451660..452922 (+) 1263 WP_111677794.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL35_RS02270 (NCTC7022_00452) - 453086..453388 (-) 303 WP_043029409.1 hypothetical protein -
  DQL35_RS02275 (NCTC7022_00453) - 453385..453804 (-) 420 WP_111677795.1 HIT family protein -
  DQL35_RS02280 (NCTC7022_00454) - 454261..454524 (-) 264 WP_231871343.1 hypothetical protein -
  DQL35_RS02285 (NCTC7022_00455) pptA 455061..455786 (+) 726 WP_111677796.1 ABC transporter ATP-binding protein Regulator
  DQL35_RS02290 (NCTC7022_00456) - 455790..456824 (+) 1035 WP_012679097.1 ABC transporter permease -
  DQL35_RS02295 (NCTC7022_00457) ccrZ 456887..457678 (+) 792 WP_012515084.1 cell cycle regulator CcrZ -
  DQL35_RS02300 (NCTC7022_00458) trmB 457678..458313 (+) 636 WP_111677797.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL35_RS02315 (NCTC7022_00460) - 458929..459444 (-) 516 WP_021320424.1 hypothetical protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26522.80 Da        Isoelectric Point: 4.8615

>NTDB_id=1136562 DQL35_RS02285 WP_111677796.1 455061..455786(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKSKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1136562 DQL35_RS02285 WP_111677796.1 455061..455786(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCAT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCCTGTATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTACGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGCTTGACGGATAAGTTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGTCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

99.17

0.734
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726

Multiple sequence alignment