Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQL15_RS08665 Genome accession   NZ_LS483323
Coordinates   1714345..1715058 (+) Length   237 a.a.
NCBI ID   WP_002991336.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8300     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1709345..1720058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL15_RS08655 (NCTC8300_01703) treC 1710415..1712043 (-) 1629 WP_011185052.1 alpha,alpha-phosphotrehalase -
  DQL15_RS08660 (NCTC8300_01704) treP 1712110..1714134 (-) 2025 WP_111689270.1 PTS system trehalose-specific EIIBC component -
  DQL15_RS08665 (NCTC8300_01705) treR 1714345..1715058 (+) 714 WP_002991336.1 trehalose operon repressor Regulator
  DQL15_RS08675 (NCTC8300_01706) - 1715337..1715675 (-) 339 WP_002991339.1 winged helix-turn-helix transcriptional regulator -
  DQL15_RS08680 (NCTC8300_01707) - 1715861..1716709 (+) 849 Protein_1610 VOC family protein -
  DQL15_RS08685 (NCTC8300_01708) yaaA 1716751..1717482 (+) 732 WP_011018309.1 peroxide stress protein YaaA -
  DQL15_RS08690 (NCTC8300_01709) nrdG 1717656..1718270 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  DQL15_RS08695 (NCTC8300_01710) - 1718270..1718779 (-) 510 WP_111689272.1 GNAT family N-acetyltransferase -
  DQL15_RS08700 (NCTC8300_01711) - 1718788..1719723 (-) 936 WP_002991347.1 Gfo/Idh/MocA family protein -
  DQL15_RS09185 (NCTC8300_01712) - 1719752..1719898 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27608.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1136497 DQL15_RS08665 WP_002991336.1 1714345..1715058(+) (treR) [Streptococcus pyogenes strain NCTC8300]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFSRRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1136497 DQL15_RS08665 WP_002991336.1 1714345..1715058(+) (treR) [Streptococcus pyogenes strain NCTC8300]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTTCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment