Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL06_RS07300 Genome accession   NZ_LS483321
Coordinates   1414181..1414990 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8314     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1409181..1419990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL06_RS07290 (NCTC8314_01466) smc 1409506..1413045 (-) 3540 WP_111689626.1 chromosome segregation protein SMC -
  DQL06_RS07295 (NCTC8314_01467) rnc 1413046..1413738 (-) 693 WP_002985639.1 ribonuclease III -
  DQL06_RS07300 (NCTC8314_01468) vicX 1414181..1414990 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQL06_RS07305 (NCTC8314_01469) vicK 1414994..1416346 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL06_RS07310 (NCTC8314_01470) vicR 1416339..1417049 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DQL06_RS07315 (NCTC8314_01471) - 1417211..1418245 (-) 1035 WP_161230152.1 DUF3114 domain-containing protein -
  DQL06_RS07320 (NCTC8314_01472) - 1418301..1419548 (-) 1248 WP_111689627.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1136374 DQL06_RS07300 WP_002985641.1 1414181..1414990(-) (vicX) [Streptococcus pyogenes strain NCTC8314]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1136374 DQL06_RS07300 WP_002985641.1 1414181..1414990(-) (vicX) [Streptococcus pyogenes strain NCTC8314]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment