Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   DQL11_RS09475 Genome accession   NZ_LS483315
Coordinates   53838..53933 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12059     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 48838..58933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL11_RS00320 (NCTC12059_00064) - 49710..51050 (+) 1341 WP_002986685.1 hypothetical protein -
  DQL11_RS00325 (NCTC12059_00065) purB 51419..52711 (+) 1293 WP_030127622.1 adenylosuccinate lyase -
  DQL11_RS00330 (NCTC12059_00066) comR 52843..53754 (+) 912 WP_002986681.1 transcriptional regulator Rgg4/ComR Regulator
  DQL11_RS09475 (NCTC12059_00067) comS 53838..53933 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  DQL11_RS00335 (NCTC12059_00068) ruvB 53980..54978 (+) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  DQL11_RS00340 (NCTC12059_00069) - 55116..55553 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  DQL11_RS00345 (NCTC12059_00070) - 55576..55977 (+) 402 WP_002986671.1 MORN repeat-containing protein -
  DQL11_RS00350 (NCTC12059_00071) - 55974..57749 (+) 1776 WP_021733211.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=1136089 DQL11_RS09475 WP_198462994.1 53838..53933(+) (comS) [Streptococcus pyogenes strain NCTC12059]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=1136089 DQL11_RS09475 WP_198462994.1 53838..53933(+) (comS) [Streptococcus pyogenes strain NCTC12059]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment