Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQL11_RS02215 Genome accession   NZ_LS483315
Coordinates   419320..420045 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC12059     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 414320..425045
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL11_RS02185 (NCTC12059_00432) - 414499..415959 (+) 1461 WP_031488467.1 NCS2 family permease -
  DQL11_RS02190 (NCTC12059_00433) tsaE 416113..416574 (+) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL11_RS02195 (NCTC12059_00434) - 416549..417073 (+) 525 WP_031488468.1 GNAT family N-acetyltransferase -
  DQL11_RS02200 (NCTC12059_00435) brpA 417082..418365 (+) 1284 WP_111704550.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL11_RS02205 (NCTC12059_00436) - 418476..418832 (-) 357 WP_031488470.1 hypothetical protein -
  DQL11_RS02210 (NCTC12059_00437) - 418829..419248 (-) 420 WP_002983376.1 HIT family protein -
  DQL11_RS02215 (NCTC12059_00438) pptA 419320..420045 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQL11_RS02220 (NCTC12059_00439) - 420048..421082 (+) 1035 WP_031577431.1 ABC transporter permease -
  DQL11_RS02225 (NCTC12059_00440) ccrZ 421146..421937 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQL11_RS02230 (NCTC12059_00441) trmB 421937..422572 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL11_RS02240 (NCTC12059_00443) rimP 422831..423367 (+) 537 WP_002983483.1 ribosome maturation factor RimP -
  DQL11_RS02245 (NCTC12059_00444) nusA 423542..424699 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  DQL11_RS02250 (NCTC12059_00445) rnpM 424715..425011 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1136057 DQL11_RS02215 WP_002983379.1 419320..420045(+) (pptA) [Streptococcus pyogenes strain NCTC12059]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1136057 DQL11_RS02215 WP_002983379.1 419320..420045(+) (pptA) [Streptococcus pyogenes strain NCTC12059]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment