Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   DQL83_RS14575 Genome accession   NZ_LS483311
Coordinates   2747906..2748793 (-) Length   295 a.a.
NCBI ID   WP_000143426.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC6136     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2742906..2753793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL83_RS14540 - 2742924..2743016 (+) 93 WP_010956583.1 hypothetical protein -
  DQL83_RS14545 (NCTC6136_02705) - 2743124..2743621 (-) 498 WP_001065268.1 glutathione peroxidase -
  DQL83_RS14550 (NCTC6136_02706) - 2743631..2743891 (-) 261 WP_001791974.1 hypothetical protein -
  DQL83_RS14560 - 2744273..2744386 (-) 114 WP_072384844.1 hypothetical protein -
  DQL83_RS14565 (NCTC6136_02707) - 2745045..2747045 (-) 2001 WP_000776753.1 ABC transporter permease -
  DQL83_RS14570 (NCTC6136_02708) - 2747042..2747797 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  DQL83_RS14575 (NCTC6136_02709) braS 2747906..2748793 (-) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  DQL83_RS14580 (NCTC6136_02710) braR 2748804..2749469 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  DQL83_RS14585 (NCTC6136_02711) - 2749495..2749695 (-) 201 WP_000604727.1 hypothetical protein -
  DQL83_RS14590 (NCTC6136_02712) - 2749893..2751317 (+) 1425 WP_000953747.1 alkaline phosphatase -
  DQL83_RS15350 (NCTC6136_02713) - 2751377..2751478 (-) 102 WP_000731976.1 SE2200 family small protein -
  DQL83_RS14600 (NCTC6136_02714) - 2751600..2752055 (-) 456 WP_000026346.1 MarR family winged helix-turn-helix transcriptional regulator -
  DQL83_RS14605 (NCTC6136_02715) - 2752300..2753061 (-) 762 WP_000323441.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34032.32 Da        Isoelectric Point: 5.8962

>NTDB_id=1135929 DQL83_RS14575 WP_000143426.1 2747906..2748793(-) (braS) [Staphylococcus aureus strain NCTC6136]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=1135929 DQL83_RS14575 WP_000143426.1 2747906..2748793(-) (braS) [Staphylococcus aureus strain NCTC6136]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997


Multiple sequence alignment