Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | DQL83_RS08540 | Genome accession | NZ_LS483311 |
| Coordinates | 1657892..1658191 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain NCTC6136 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1652892..1663191
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL83_RS08515 (NCTC6136_01597) | gcvPA | 1654104..1655450 (-) | 1347 | WP_000019690.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| DQL83_RS08520 (NCTC6136_01598) | gcvT | 1655470..1656561 (-) | 1092 | WP_000093348.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DQL83_RS08525 | - | 1656720..1657244 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| DQL83_RS08530 | - | 1657234..1657380 (-) | 147 | WP_001792109.1 | hypothetical protein | - |
| DQL83_RS08535 (NCTC6136_01600) | comGF | 1657477..1657974 (-) | 498 | WP_029694050.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL83_RS08540 (NCTC6136_01601) | comGE | 1657892..1658191 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| DQL83_RS08545 (NCTC6136_01602) | comGD | 1658178..1658624 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DQL83_RS08550 (NCTC6136_01603) | comGC | 1658602..1658913 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL83_RS08555 (NCTC6136_01604) | comGB | 1658927..1659997 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL83_RS08560 (NCTC6136_01605) | comGA | 1659969..1660943 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL83_RS08565 (NCTC6136_01606) | - | 1660995..1661618 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| DQL83_RS08570 (NCTC6136_01607) | - | 1661615..1661944 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| DQL83_RS08575 (NCTC6136_01608) | - | 1661944..1662930 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| DQL83_RS08580 | - | 1662927..1663130 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1135907 DQL83_RS08540 WP_000844413.1 1657892..1658191(-) (comGE) [Staphylococcus aureus strain NCTC6136]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1135907 DQL83_RS08540 WP_000844413.1 1657892..1658191(-) (comGE) [Staphylococcus aureus strain NCTC6136]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |