Detailed information NTG1135739

Bioinformatically predicted

Overview

• Name: treR
• Type: Regulator
• Locus tag: DQL78_RS09490
• Genome accession: NZ_LS483306
• Coordinates: 1871056..1871772 (+)
• Length: 238 a.a.
• NCBI ID: WP_016251015.1
• Uniprot ID: S1QZC3
• Organism: Enterococcus cecorum strain NCTC12421
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1866056..1876772

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL78_RS09475 (NCTC12421_01933)	licT	1866270..1867106 (-)	837	WP_016251018.1	BglG family transcription antiterminator LicT	-
DQL78_RS09480 (NCTC12421_01934)	-	1867321..1868505 (-)	1185	WP_016251017.1	NupC/NupG family nucleoside CNT transporter	-
DQL78_RS09485 (NCTC12421_01935)	treP	1868717..1870720 (-)	2004	WP_016251016.1	PTS system trehalose-specific EIIBC component	-
DQL78_RS09490 (NCTC12421_01936)	treR	1871056..1871772 (+)	717	WP_016251015.1	trehalose operon repressor	Regulator
DQL78_RS09500 (NCTC12421_01938)	-	1872133..1873533 (-)	1401	WP_016251013.1	glycoside hydrolase family 1 protein	-
DQL78_RS09505 (NCTC12421_01939)	-	1873553..1874902 (-)	1350	WP_016251012.1	family 20 glycosylhydrolase	-

Sequence

Protein

• Length: 238 a.a.
• Molecular weight: 27948.89 Da
• Isoelectric Point: 6.9278

>NTDB_id=1135739 DQL78_RS09490 WP_016251015.1 1871056..1871772(+) (treR) [Enterococcus cecorum strain NCTC12421]
MKIYELIYQQLESEILLGNYPPETFLPSESQLAKHFEASRDTIRKALQQLTNHGYIKKVQGKGSLVLRREQLRFPVSGLT
SYKELQNAYGYDSSTQVESLTKLIVKKELAEKTGFEENHEVWSVLRSRKIDGQKVILDWDLIALEFVKELDTEIAKDSLY
AYFEKQLGLEISFAEKEITVDPVKTLDKLYLDLNEQDTHIVSVTSRVFLKNMRQFQYTESHHRLDKFKFHDFARRHQL

Nucleotide

• Length: 717 bp

>NTDB_id=1135739 DQL78_RS09490 WP_016251015.1 1871056..1871772(+) (treR) [Enterococcus cecorum strain NCTC12421]
ATGAAAATATATGAATTAATCTATCAACAATTAGAAAGTGAAATCTTATTGGGAAATTATCCCCCAGAAACCTTTTTACC
AAGTGAAAGCCAATTAGCTAAGCACTTTGAAGCCTCACGCGATACGATTCGCAAAGCCTTGCAGCAATTGACCAACCATG
GCTATATCAAAAAAGTTCAAGGTAAAGGTTCATTAGTCTTAAGAAGAGAACAGTTACGTTTCCCTGTTTCTGGTCTAACT
AGTTATAAAGAGTTACAAAATGCCTATGGTTATGATAGCAGCACCCAAGTCGAAAGTTTAACCAAGCTAATTGTCAAAAA
AGAACTAGCTGAAAAAACTGGCTTTGAAGAAAATCATGAAGTTTGGTCCGTCCTAAGAAGCCGTAAAATTGATGGGCAAA
AGGTAATTTTAGATTGGGATTTGATTGCGCTAGAATTTGTGAAAGAGCTCGATACTGAAATTGCCAAAGATTCCTTATAT
GCATATTTTGAAAAACAGCTCGGACTAGAAATCTCTTTTGCTGAAAAAGAAATTACGGTTGATCCTGTTAAAACCTTGGA
TAAATTATATTTGGATTTAAATGAGCAAGATACCCACATTGTTTCGGTGACAAGTCGCGTCTTCTTAAAAAATATGCGGC
AATTTCAATATACAGAAAGCCATCATCGCCTCGACAAGTTTAAATTTCATGATTTTGCTCGTCGCCACCAATTGTAA

Domains

Predicted by InterproScan.

• UTRA domain (UTRA) (89-228)

• Bacterial regulatory proteins, gntR family (GntR) (4-66)

3D structure

• AlphaFold DB: S1QZC3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
treR	Streptococcus mutans UA159	48.523	99.58	0.483