Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   DQL62_RS13500 Genome accession   NZ_LS483300
Coordinates   2600531..2601418 (-) Length   295 a.a.
NCBI ID   WP_000143421.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC7485     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2595531..2606418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL62_RS13465 - 2595550..2595642 (+) 93 WP_010956583.1 hypothetical protein -
  DQL62_RS13470 (NCTC7485_02547) - 2595750..2596247 (-) 498 WP_001065267.1 glutathione peroxidase -
  DQL62_RS13475 (NCTC7485_02548) - 2596257..2596517 (-) 261 WP_078104073.1 hypothetical protein -
  DQL62_RS13485 - 2596899..2597012 (-) 114 WP_078062686.1 hypothetical protein -
  DQL62_RS13490 (NCTC7485_02549) - 2597671..2599671 (-) 2001 WP_000776727.1 ABC transporter permease -
  DQL62_RS13495 (NCTC7485_02550) - 2599668..2600423 (-) 756 WP_000923773.1 ABC transporter ATP-binding protein -
  DQL62_RS13500 (NCTC7485_02551) braS 2600531..2601418 (-) 888 WP_000143421.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  DQL62_RS13505 (NCTC7485_02552) braR 2601429..2602094 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  DQL62_RS13510 (NCTC7485_02553) - 2602120..2602320 (-) 201 WP_000604725.1 hypothetical protein -
  DQL62_RS13515 (NCTC7485_02554) - 2602518..2603942 (+) 1425 WP_000953751.1 alkaline phosphatase -
  DQL62_RS14330 (NCTC7485_02555) - 2604002..2604103 (-) 102 WP_000731972.1 SE2200 family small protein -
  DQL62_RS13525 (NCTC7485_02556) - 2604225..2604680 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  DQL62_RS13530 (NCTC7485_02557) - 2604925..2605686 (-) 762 WP_000323448.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34075.34 Da        Isoelectric Point: 5.8962

>NTDB_id=1135535 DQL62_RS13500 WP_000143421.1 2600531..2601418(-) (braS) [Staphylococcus aureus strain NCTC7485]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNESTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=1135535 DQL62_RS13500 WP_000143421.1 2600531..2601418(-) (braS) [Staphylococcus aureus strain NCTC7485]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGACAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGAGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99


Multiple sequence alignment