Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQM39_RS02545 Genome accession   NZ_LS483298
Coordinates   460230..460955 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC8225     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 455230..465955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM39_RS02515 (NCTC8225_00503) - 455409..456869 (+) 1461 WP_002983366.1 NCS2 family permease -
  DQM39_RS02520 (NCTC8225_00504) tsaE 457023..457484 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM39_RS02525 (NCTC8225_00505) - 457459..457983 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  DQM39_RS02530 (NCTC8225_00506) brpA 457992..459275 (+) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQM39_RS02535 (NCTC8225_00507) - 459386..459742 (-) 357 WP_002983373.1 hypothetical protein -
  DQM39_RS02540 (NCTC8225_00508) - 459739..460158 (-) 420 WP_002983376.1 HIT family protein -
  DQM39_RS02545 (NCTC8225_00509) pptA 460230..460955 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQM39_RS02550 (NCTC8225_00510) - 460958..461992 (+) 1035 WP_002983381.1 ABC transporter permease -
  DQM39_RS02555 (NCTC8225_00511) ccrZ 462056..462847 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQM39_RS02560 (NCTC8225_00512) trmB 462847..463482 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM39_RS02570 (NCTC8225_00514) - 463680..464759 (-) 1080 Protein_451 site-specific integrase -
  DQM39_RS02575 (NCTC8225_00515) - 464880..465737 (-) 858 WP_111680774.1 DNA adenine methylase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1135462 DQM39_RS02545 WP_002983379.1 460230..460955(+) (pptA) [Streptococcus pyogenes strain NCTC8225]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1135462 DQM39_RS02545 WP_002983379.1 460230..460955(+) (pptA) [Streptococcus pyogenes strain NCTC8225]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCTTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment