Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | N837_RS05360 | Genome accession | NZ_CP006689 |
| Coordinates | 1010734..1011036 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni NCTC 11168-GSv strain NCTC 11168-rNRC | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1005734..1016036
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N837_RS05335 (N920_05365) | rpsR | 1006096..1006356 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| N837_RS05340 (N920_05370) | lon | 1006417..1008792 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| N837_RS05345 (N920_05375) | - | 1008809..1009456 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| N837_RS05350 (N920_05380) | fliW | 1009617..1010006 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| N837_RS05355 (N920_05385) | proC | 1010006..1010737 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| N837_RS05360 (N920_05390) | ctsT | 1010734..1011036 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| N837_RS05365 (N920_05395) | - | 1011033..1011695 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| N837_RS05370 (N920_05400) | - | 1011692..1012144 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| N837_RS05375 (N920_05405) | hemD | 1012141..1012770 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| N837_RS05380 (N920_05410) | thiE | 1012748..1013380 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| N837_RS05385 (N920_05415) | thiD | 1013370..1014182 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| N837_RS05390 (N920_05420) | - | 1014179..1014865 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| N837_RS05395 (N920_05425) | - | 1014862..1015623 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=113528 N837_RS05360 WP_002853046.1 1010734..1011036(+) (ctsT) [Campylobacter jejuni subsp. jejuni NCTC 11168-GSv strain NCTC 11168-rNRC]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=113528 N837_RS05360 WP_002853046.1 1010734..1011036(+) (ctsT) [Campylobacter jejuni subsp. jejuni NCTC 11168-GSv strain NCTC 11168-rNRC]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |