Detailed information NTG0113476

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: N917_RS05700
• Genome accession: NZ_CP006687
• Coordinates: 1080895..1081854 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni NCTC 11168-mcK12E5
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1075895..1086854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N917_RS05675 (N917_05695)	neuC	1076464..1077579 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
N917_RS09140	-	1077576..1078490 (+)	915	Protein_1087	beta-1,4-N-acetylgalactosaminyltransferase	-
N917_RS09145	-	1078524..1079186 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
N917_RS05690	-	1079181..1080028 (-)	848	Protein_1089	glycosyltransferase	-
N917_RS05695 (N917_05715)	waaV	1080012..1080836 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
N917_RS05700 (N917_05720)	waaF	1080895..1081854 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
N917_RS05705 (N917_05725)	gmhA	1081835..1082395 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
N917_RS05710 (N917_05730)	rfaE1	1082392..1083777 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
N917_RS05715 (N917_05735)	rfaD	1083770..1084723 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
N917_RS05720 (N917_05740)	gmhB	1084724..1085284 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
N917_RS05725 (N917_05745)	-	1085366..1085668 (+)	303	WP_002852762.1	cytochrome c	-
N917_RS05730 (N917_05750)	ccoS	1085691..1085897 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=113476 N917_RS05700 WP_002875425.1 1080895..1081854(+) (waaF) [Campylobacter jejuni subsp. jejuni NCTC 11168-mcK12E5]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=113476 N917_RS05700 WP_002875425.1 1080895..1081854(+) (waaF) [Campylobacter jejuni subsp. jejuni NCTC 11168-mcK12E5]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1