Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   JMX74_RS16860 Genome accession   NZ_LR890735
Coordinates   3353734..3354330 (-) Length   198 a.a.
NCBI ID   WP_004893148.1    Uniprot ID   A0A483M0T8
Organism   Klebsiella pneumoniae strain INF323 isolate INF323     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3348734..3359330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMX74_RS16845 helD 3348942..3350996 (-) 2055 WP_004179218.1 DNA helicase IV -
  JMX74_RS16850 - 3351121..3351567 (+) 447 WP_002898425.1 YccF domain-containing protein -
  JMX74_RS16855 yccS 3351585..3353720 (+) 2136 WP_002898422.1 YccS family putative transporter -
  JMX74_RS16860 sxy/tfoX 3353734..3354330 (-) 597 WP_004893148.1 TfoX/Sxy family DNA transformation protein Regulator
  JMX74_RS16865 sulA 3354679..3355188 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  JMX74_RS16870 ompA 3355541..3356611 (+) 1071 WP_002898408.1 porin OmpA -
  JMX74_RS16875 matP 3356743..3357195 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  JMX74_RS16880 - 3357381..3359138 (+) 1758 WP_023341258.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22562.12 Da        Isoelectric Point: 10.1298

>NTDB_id=1134743 JMX74_RS16860 WP_004893148.1 3353734..3354330(-) (sxy/tfoX) [Klebsiella pneumoniae strain INF323 isolate INF323]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIGGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1134743 JMX74_RS16860 WP_004893148.1 3353734..3354330(-) (sxy/tfoX) [Klebsiella pneumoniae strain INF323 isolate INF323]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCAGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGGCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(16-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A483M0T8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment