Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   JMX14_RS09940 Genome accession   NZ_LR890471
Coordinates   2072886..2073482 (+) Length   198 a.a.
NCBI ID   WP_004893148.1    Uniprot ID   A0A483M0T8
Organism   Klebsiella pneumoniae strain INF168 isolate INF168     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2067886..2078482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMX14_RS09920 - 2068084..2069841 (-) 1758 WP_004147851.1 Lon protease family protein -
  JMX14_RS09925 matP 2070027..2070479 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  JMX14_RS09930 ompA 2070611..2071675 (-) 1065 WP_064278948.1 porin OmpA -
  JMX14_RS09935 sulA 2072028..2072537 (-) 510 WP_004893150.1 SOS-induced cell division inhibitor SulA -
  JMX14_RS09940 sxy/tfoX 2072886..2073482 (+) 597 WP_004893148.1 TfoX/Sxy family DNA transformation protein Regulator
  JMX14_RS09945 yccS 2073496..2075631 (-) 2136 WP_002898422.1 YccS family putative transporter -
  JMX14_RS09950 - 2075649..2076095 (-) 447 WP_002898425.1 YccF domain-containing protein -
  JMX14_RS09955 helD 2076220..2078274 (+) 2055 WP_004179218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22562.12 Da        Isoelectric Point: 10.1298

>NTDB_id=1134051 JMX14_RS09940 WP_004893148.1 2072886..2073482(+) (sxy/tfoX) [Klebsiella pneumoniae strain INF168 isolate INF168]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIGGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1134051 JMX14_RS09940 WP_004893148.1 2072886..2073482(+) (sxy/tfoX) [Klebsiella pneumoniae strain INF168 isolate INF168]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCAGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGGCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(16-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A483M0T8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment