Detailed information NTG0113378

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: MEPL_RS00145
• Genome accession: NZ_CP006683
• Coordinates: 40879..42249 (+)
• Length: 456 a.a.
• NCBI ID: WP_014372822.1
• Uniprot ID: -
• Organism: Melissococcus plutonius S1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 35879..47249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MEPL_RS00135 (MEPL_c000270)	-	36600..39245 (-)	2646	WP_013772969.1	YfhO family protein	-
MEPL_RS00140 (MEPL_c000280)	-	40299..40778 (+)	480	WP_048589595.1	dUTP diphosphatase	-
MEPL_RS00145 (MEPL_c000290)	radA	40879..42249 (+)	1371	WP_014372822.1	DNA repair protein RadA	Machinery gene
MEPL_RS00150 (MEPL_c000300)	-	42550..43689 (+)	1140	WP_013772972.1	PIN/TRAM domain-containing protein	-
MEPL_RS00155 (MEPL_c000310)	gltX	44212..45672 (+)	1461	WP_048589596.1	glutamate--tRNA ligase	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 50001.90 Da
• Isoelectric Point: 8.7774

>NTDB_id=113378 MEPL_RS00145 WP_014372822.1 40879..42249(+) (radA) [Melissococcus plutonius S1]
MAKKTKSQFECQSCGYVSPKYLGRCPNCGKWNSMTEEIIQDTTDRRTRISLTGKKVQPQRLTEVIPKKEPRIKTQLAELN
RVLGGGVVPGSLLLIGGDPGIGKSTLLLQVSQQLAMIGGKVLYVSGEESAEQIKMRAERLGTINTEFYLYAETDMSSIAK
SIEELMPDYVIIDSIQTMTQPDITSVAGSVSQVRETTAELLKLAKTNNIAIFIVGHVTKEGSIAGPRMLEHMVDTVLYFE
GDKHHTFRILRTVKNRFGSTNEIGIFEMHDYGLTEVTNPSQMFLEERLADATGSAIVAALEGTRPILVEIQALITPTVFG
TAKRTTTGLDFNRVSLIMAVLEKRAGLLLQNQDAYLKAAGGVKINEPAIDLAIAVSIASSYKEKGTKASECFIGEIGLTG
EIRRVANVEQRVREAQKLGFTKIYLPKNNLGGWTPPKGIEVVGVMTISETIKKIFQ

Nucleotide

• Length: 1371 bp

>NTDB_id=113378 MEPL_RS00145 WP_014372822.1 40879..42249(+) (radA) [Melissococcus plutonius S1]
ATGGCGAAAAAGACGAAAAGTCAATTCGAATGTCAAAGTTGTGGCTATGTATCTCCGAAGTACTTGGGACGTTGTCCTAA
TTGTGGTAAATGGAATTCAATGACCGAAGAAATCATACAAGATACAACTGATCGACGTACACGAATTAGTTTAACAGGAA
AAAAAGTGCAACCTCAACGATTAACAGAGGTTATTCCTAAAAAAGAGCCAAGAATAAAAACGCAATTAGCAGAATTAAAT
CGTGTTCTAGGTGGAGGAGTTGTGCCTGGATCTCTCCTTTTAATTGGCGGTGATCCTGGAATTGGAAAATCAACCTTGCT
TTTACAAGTCTCCCAACAATTGGCAATGATTGGTGGCAAGGTCCTCTATGTTTCTGGTGAAGAGAGCGCAGAACAAATTA
AAATGCGTGCTGAACGATTGGGAACAATCAATACAGAATTCTATCTATACGCAGAAACTGATATGTCAAGCATTGCTAAA
TCCATTGAAGAATTGATGCCTGATTATGTCATCATTGATTCTATTCAAACGATGACGCAACCTGATATAACCAGTGTTGC
TGGCAGTGTTAGCCAAGTTCGAGAAACGACAGCTGAATTGTTGAAACTAGCTAAAACCAATAATATTGCTATTTTTATTG
TTGGACATGTCACAAAGGAAGGATCAATTGCCGGTCCAAGAATGCTAGAACATATGGTTGATACGGTTTTATATTTTGAA
GGAGACAAGCACCATACCTTTCGGATTTTACGTACTGTCAAAAATCGGTTTGGTTCAACCAATGAAATTGGTATCTTTGA
AATGCATGATTATGGCTTAACTGAGGTTACTAACCCTTCACAAATGTTTTTGGAGGAACGTTTGGCAGATGCTACAGGCT
CTGCCATTGTTGCTGCCTTGGAAGGTACTCGACCTATTTTGGTAGAAATTCAAGCTTTAATAACACCAACGGTTTTTGGA
ACTGCTAAGCGAACGACTACTGGATTAGATTTTAATCGGGTTTCATTAATCATGGCTGTTTTGGAAAAAAGAGCCGGATT
ACTTTTACAAAATCAAGATGCCTATCTAAAGGCAGCTGGTGGGGTAAAAATTAATGAACCAGCAATTGATCTGGCGATAG
CTGTAAGCATTGCTTCTAGTTACAAAGAAAAAGGAACAAAAGCTTCAGAATGTTTTATTGGTGAAATTGGCTTGACCGGA
GAAATTAGACGTGTGGCAAACGTGGAACAACGTGTCCGAGAAGCTCAAAAGCTAGGTTTTACTAAAATTTATTTACCGAA
AAATAATTTGGGCGGTTGGACGCCACCTAAAGGGATTGAAGTAGTTGGTGTTATGACGATCTCTGAAACCATTAAAAAAA
TCTTTCAATGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (68-221)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

• Subunit ChlI of Mg-chelatase (ChlI) (362-429)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus mitis NCTC 12261	72.527	99.781	0.724
radA	Streptococcus mitis SK321	72.308	99.781	0.721
radA	Streptococcus pneumoniae Rx1	72.308	99.781	0.721
radA	Streptococcus pneumoniae D39	72.308	99.781	0.721
radA	Streptococcus pneumoniae R6	72.308	99.781	0.721
radA	Streptococcus pneumoniae TIGR4	72.308	99.781	0.721
radA	Bacillus subtilis subsp. subtilis str. 168	65.854	98.904	0.651