Detailed information NTG0113335

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EO53_RS20855
• Genome accession: NZ_CP009685
• Coordinates: 4212537..4213562 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4207537..4218562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EO53_RS20835 (EO53_20835)	metJ	4208598..4208915 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
EO53_RS20840 (EO53_20840)	yiiX	4209099..4209707 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
EO53_RS20845 (EO53_20845)	rpmE	4209768..4209980 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EO53_RS20850 (EO53_20850)	priA	4210183..4212381 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
EO53_RS20855 (EO53_20855)	cytR	4212537..4213562 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EO53_RS20860 (EO53_20860)	ftsN	4213654..4214613 (+)	960	WP_000068828.1	cell division protein FtsN	-
EO53_RS20865 (EO53_20865)	hslV	4214706..4215236 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EO53_RS20870 (EO53_20870)	hslU	4215246..4216577 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EO53_RS20875 (EO53_20875)	menA	4216644..4217570 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EO53_RS20880 (EO53_20880)	rraA	4217663..4218148 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EO53_RS20885 (EO53_20885)	zapB	4218233..4218478 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=113335 EO53_RS20855 WP_000644904.1 4212537..4213562(+) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=113335 EO53_RS20855 WP_000644904.1 4212537..4213562(+) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628