Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   JLZ97_RS14735 Genome accession   NZ_LR882990
Coordinates   3043340..3043969 (-) Length   209 a.a.
NCBI ID   WP_001612760.1    Uniprot ID   A0A377CFT3
Organism   Escherichia coli isolate L7_E1373_ETEC     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 3038340..3048969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JLZ97_RS14720 (ETECE1373_02991) helD 3038582..3040636 (-) 2055 WP_001612761.1 DNA helicase IV -
  JLZ97_RS14725 (ETECE1373_02992) yccF 3040759..3041205 (+) 447 WP_001261235.1 YccF domain-containing protein -
  JLZ97_RS14730 (ETECE1373_02993) yccS 3041215..3043377 (+) 2163 WP_000323868.1 YccS family putative transporter -
  JLZ97_RS14735 (ETECE1373_02994) sxy/tfoX 3043340..3043969 (-) 630 WP_001612760.1 CRP-S regulon transcriptional coactivator Sxy Regulator
  JLZ97_RS14740 (ETECE1373_02995) sulA 3044188..3044697 (+) 510 WP_000288706.1 SOS-induced cell division inhibitor SulA -
  JLZ97_RS14745 (ETECE1373_02996) ompA 3045054..3046106 (+) 1053 WP_001307702.1 porin OmpA -
  JLZ97_RS14750 (ETECE1373_02997) matP 3046183..3046635 (-) 453 WP_000877161.1 macrodomain Ter protein MatP -
  JLZ97_RS14755 (ETECE1373_02998) ycbZ 3046821..3048581 (+) 1761 WP_001612759.1 Lon protease family protein -

Sequence


Protein


Download         Length: 209 a.a.        Molecular weight: 24146.03 Da        Isoelectric Point: 9.4081

>NTDB_id=1133032 JLZ97_RS14735 WP_001612760.1 3043340..3043969(-) (sxy/tfoX) [Escherichia coli isolate L7_E1373_ETEC]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSNGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=1133032 JLZ97_RS14735 WP_001612760.1 3043340..3043969(-) (sxy/tfoX) [Escherichia coli isolate L7_E1373_ETEC]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTATTTGCGATGGTTTCTAATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A377CFT3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

99.522

100

0.995


Multiple sequence alignment