Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H7A87_RS14420 Genome accession   NZ_LR861805
Coordinates   3377576..3377977 (-) Length   133 a.a.
NCBI ID   WP_104562659.1    Uniprot ID   -
Organism   Xanthomonas sp. CPBF 426 isolate     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3372576..3382977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7A87_RS14405 (XSP_002893) - 3374590..3376626 (-) 2037 WP_119127704.1 methyl-accepting chemotaxis protein -
  H7A87_RS14410 (XSP_002894) - 3376666..3377196 (-) 531 WP_014508568.1 chemotaxis protein CheW -
  H7A87_RS14415 (XSP_002895) - 3377196..3377558 (-) 363 WP_024940328.1 response regulator -
  H7A87_RS14420 (XSP_002896) pilG 3377576..3377977 (-) 402 WP_104562659.1 twitching motility response regulator PilG Regulator
  H7A87_RS14425 (XSP_002897) gshB 3378217..3379167 (+) 951 WP_104584632.1 glutathione synthase -
  H7A87_RS14430 (XSP_002898) - 3379164..3380039 (+) 876 WP_104584634.1 energy transducer TonB -
  H7A87_RS14435 (XSP_002899) - 3380122..3381036 (-) 915 WP_115677714.1 ADP-ribosylglycohydrolase family protein -
  H7A87_RS14440 (XSP_002900) tsaB 3381033..3381752 (-) 720 WP_119127702.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14699.09 Da        Isoelectric Point: 6.9539

>NTDB_id=1132456 H7A87_RS14420 WP_104562659.1 3377576..3377977(-) (pilG) [Xanthomonas sp. CPBF 426 isolate]
MTENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1132456 H7A87_RS14420 WP_104562659.1 3377576..3377977(-) (pilG) [Xanthomonas sp. CPBF 426 isolate]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGCTGTGAAGTAGTGACGGCGACCGATGGTTTCGAGGCACTGGCCAAGATTG
CCGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCGTTCACACGTGAAGAACTACTGAGCGCGATTCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment