Detailed information NTG0113241

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: SAGV69_RS09055
• Genome accession: NZ_CP009681
• Coordinates: 1745408..1746490 (-)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus strain Gv69
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1740408..1751490

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAGV69_RS09035	-	1741016..1741120 (-)	105	WP_001790092.1	hypothetical protein	-
SAGV69_RS09040 (SAGV69_04211)	secA	1741162..1743694 (-)	2533	Protein_1724	preprotein translocase subunit SecA	-
SAGV69_RS09045 (SAGV69_01849)	raiA	1744108..1744680 (-)	573	WP_000617735.1	ribosome-associated translation inhibitor RaiA	-
SAGV69_RS09050 (SAGV69_04218)	-	1744741..1745415 (-)	675	WP_001057965.1	ComF family protein	-
SAGV69_RS09055 (SAGV69_01852)	comFA	1745408..1746490 (-)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
SAGV69_RS09060 (SAGV69_01854)	fakB1	1746854..1747720 (-)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
SAGV69_RS09065 (SAGV69_01855)	-	1747864..1748505 (+)	642	WP_000192947.1	YigZ family protein	-
SAGV69_RS09070 (SAGV69_01856)	-	1748675..1749730 (-)	1056	WP_000258151.1	MraY family glycosyltransferase	-
SAGV69_RS09075 (SAGV69_01857)	-	1750048..1751118 (+)	1071	WP_000460983.1	GGDEF domain-containing protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=113241 SAGV69_RS09055 WP_001548033.1 1745408..1746490(-) (comFA) [Staphylococcus aureus strain Gv69]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=113241 SAGV69_RS09055 WP_001548033.1 1745408..1746490(-) (comFA) [Staphylococcus aureus strain Gv69]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367