Detailed information NTG1132372

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CHRYMOREF3P_RS14670
• Genome accession: NZ_LR824569
• Coordinates: 3165909..3167018 (-)
• Length: 369 a.a.
• NCBI ID: WP_077413353.1
• Uniprot ID: A0A7U7CZ77
• Organism: Chryseobacterium sp. JV274 strain F3_Prior isolate F3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3160909..3172018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHRYMOREF3P_RS14645 (CHRYMOREF3P_3018)	-	3161823..3162794 (+)	972	WP_180564926.1	ion channel	-
CHRYMOREF3P_RS14650 (CHRYMOREF3P_3019)	-	3162795..3163283 (+)	489	WP_180564927.1	YkgJ family cysteine cluster protein	-
CHRYMOREF3P_RS14655 (CHRYMOREF3P_3020)	-	3163514..3163816 (+)	303	WP_077413351.1	hypothetical protein	-
CHRYMOREF3P_RS14660 (CHRYMOREF3P_3021)	-	3163861..3164229 (-)	369	WP_180564928.1	iron chaperone	-
CHRYMOREF3P_RS14665 (CHRYMOREF3P_3022)	gdhA	3164360..3165718 (-)	1359	WP_047376148.1	NADP-specific glutamate dehydrogenase	-
CHRYMOREF3P_RS14670 (CHRYMOREF3P_3023)	dprA	3165909..3167018 (-)	1110	WP_077413353.1	DNA-processing protein DprA	Machinery gene
CHRYMOREF3P_RS14675 (CHRYMOREF3P_3024)	-	3167053..3167820 (-)	768	WP_077413354.1	rhomboid family intramembrane serine protease	-
CHRYMOREF3P_RS14680 (CHRYMOREF3P_3025)	-	3168068..3168994 (+)	927	WP_077413355.1	DUF3078 domain-containing protein	-
CHRYMOREF3P_RS14685 (CHRYMOREF3P_3026)	-	3169222..3170145 (+)	924	WP_077413356.1	DUF3078 domain-containing protein	-
CHRYMOREF3P_RS14690 (CHRYMOREF3P_3027)	sufD	3170222..3171529 (-)	1308	WP_077413671.1	Fe-S cluster assembly protein SufD	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41496.33 Da
• Isoelectric Point: 6.7647

>NTDB_id=1132372 CHRYMOREF3P_RS14670 WP_077413353.1 3165909..3167018(-) (dprA) [Chryseobacterium sp. JV274 strain F3_Prior isolate F3]
MISEEYFYAIALRECSQIGDIHFHKLVHTFGSAQEAWKRAKKEYKKLEGIGQKTVSDIGNNNHLEFAEEEINFCEKNNIQ
IRLKHLRETPLLLNECNDAPAILYQKGKIDDTLSKVSIVGTRNMTGYGQKFIEDFFEATQSSRYTSVSGLALGVDKEVHE
QSILHRKPTVAVLAHGFQYLYPSKNRKLSEKILEEGGTLITEFSSSQKPDRENFIQRNRIVAGMSPATIVVETGFGGGSV
STAAFANDYNRDVFALPGKITDLCSQGCNQLIFHNKATAISTIKDLISMLGFNGPKEKIEELFPYSETTIQLSDNQYLIY
QSIKDQPQISLDDLSQKINIPPYKILPIILELELLGKVKSFSGRQFIAI

Nucleotide

• Length: 1110 bp

>NTDB_id=1132372 CHRYMOREF3P_RS14670 WP_077413353.1 3165909..3167018(-) (dprA) [Chryseobacterium sp. JV274 strain F3_Prior isolate F3]
ATGATTTCCGAAGAATACTTTTATGCAATCGCCCTTCGCGAATGCAGCCAGATAGGTGATATTCATTTTCATAAACTTGT
CCATACTTTTGGAAGTGCTCAGGAAGCATGGAAAAGAGCAAAGAAAGAATATAAAAAACTGGAAGGCATAGGACAAAAAA
CAGTTTCAGATATTGGGAATAACAACCATTTGGAATTCGCAGAAGAAGAAATAAATTTTTGCGAAAAGAATAATATTCAG
ATCAGGCTGAAGCATCTTCGTGAAACTCCTTTACTGCTTAATGAATGTAATGATGCACCGGCTATTCTTTATCAGAAAGG
AAAGATTGATGATACACTGTCAAAAGTAAGTATTGTAGGAACCCGGAATATGACTGGCTATGGTCAAAAATTTATTGAAG
ATTTTTTTGAAGCAACCCAATCTTCAAGATATACATCAGTAAGCGGTCTCGCTCTTGGAGTTGACAAAGAGGTTCATGAA
CAGTCTATTCTTCATCGAAAACCCACTGTAGCAGTTCTTGCACATGGTTTCCAATATTTATATCCATCAAAAAACAGAAA
ACTTTCAGAGAAAATTTTGGAGGAAGGAGGTACATTAATCACAGAGTTCAGCTCTTCCCAAAAACCAGACCGTGAAAACT
TCATCCAGAGGAATAGAATTGTAGCAGGAATGTCTCCCGCAACCATTGTGGTGGAAACTGGTTTTGGAGGAGGATCTGTA
AGCACTGCTGCTTTTGCCAATGATTATAACCGTGATGTCTTTGCCCTTCCCGGAAAAATTACAGACCTCTGCAGCCAGGG
ATGTAATCAGCTGATTTTCCATAATAAAGCAACAGCCATTTCTACTATAAAAGATCTTATAAGCATGCTTGGGTTTAATG
GTCCCAAAGAAAAAATCGAAGAGTTATTTCCTTATAGTGAGACCACAATACAATTGTCTGACAATCAATATTTAATATAT
CAATCTATTAAAGACCAACCACAGATTTCTCTGGATGATCTGTCACAGAAAATTAATATTCCTCCCTACAAAATTTTACC
AATAATTTTGGAATTGGAACTTTTAGGGAAAGTAAAATCATTTTCCGGGAGGCAATTCATCGCAATTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

3D structure

• AlphaFold DB: A0A7U7CZ77

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	51.648	98.645	0.509