Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   H1W80_RS09180 Genome accession   NZ_LR822040
Coordinates   1766277..1767044 (+) Length   255 a.a.
NCBI ID   WP_011226714.1    Uniprot ID   Q5M227
Organism   Streptococcus thermophilus isolate STH_CIRM_1125     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1761277..1772044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W80_RS09165 (STHERMO_2063) - 1763593..1764276 (-) 684 WP_011226711.1 YoaK family protein -
  H1W80_RS09170 (STHERMO_2064) rlmH 1764292..1764771 (-) 480 WP_084829945.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  H1W80_RS09175 (STHERMO_2065) htrA 1764976..1766211 (+) 1236 WP_087010237.1 S1C family serine protease Regulator
  H1W80_RS09180 (STHERMO_2066) spo0J 1766277..1767044 (+) 768 WP_011226714.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29485.94 Da        Isoelectric Point: 9.6649

>NTDB_id=1132029 H1W80_RS09180 WP_011226714.1 1766277..1767044(+) (spo0J) [Streptococcus thermophilus isolate STH_CIRM_1125]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDIHVKDKEKELERLLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1132029 H1W80_RS09180 WP_011226714.1 1766277..1767044(+) (spo0J) [Streptococcus thermophilus isolate STH_CIRM_1125]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATATCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATTACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M227

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569

Multiple sequence alignment