Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   H1X38_RS03575 Genome accession   NZ_LR822035
Coordinates   674398..674691 (+) Length   97 a.a.
NCBI ID   WP_002890617.1    Uniprot ID   J7TXL7
Organism   Streptococcus thermophilus isolate STH_CIRM_1051     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 669398..679691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1X38_RS03555 (STHERMO_0749) - 670550..671695 (+) 1146 WP_014727403.1 AbiH family protein -
  H1X38_RS03560 (STHERMO_0750) - 671857..672576 (+) 720 WP_014727404.1 hypothetical protein -
  H1X38_RS03565 (STHERMO_0751) - 672628..673878 (+) 1251 WP_014727405.1 restriction endonuclease subunit S -
  H1X38_RS03570 (STHERMO_0752) - 674043..674408 (+) 366 WP_014727406.1 type II toxin-antitoxin system RelE/ParE family toxin -
  H1X38_RS03575 (STHERMO_0753) HI0659 674398..674691 (+) 294 WP_002890617.1 helix-turn-helix domain-containing protein Machinery gene
  H1X38_RS03580 (STHERMO_0754) - 674713..676314 (+) 1602 WP_041829288.1 type I restriction-modification system subunit M -
  H1X38_RS03585 (STHERMO_0755) - 676392..676814 (+) 423 Protein_653 PD-(D/E)XK nuclease family transposase -
  H1X38_RS10240 (STHERMO_0757) - 676912..677912 (+) 1001 Protein_654 DNA/RNA non-specific endonuclease -
  H1X38_RS03595 (STHERMO_0758) - 678062..678622 (+) 561 WP_014621411.1 LemA family protein -
  H1X38_RS03600 (STHERMO_0759) htpX 678624..679523 (+) 900 WP_014621412.1 zinc metalloprotease HtpX -

Sequence


Protein


Download         Length: 97 a.a.        Molecular weight: 10778.52 Da        Isoelectric Point: 5.8962

>NTDB_id=1131763 H1X38_RS03575 WP_002890617.1 674398..674691(+) (HI0659) [Streptococcus thermophilus isolate STH_CIRM_1051]
MKNSAIGSNWKDVRAELFTKEEILESDLRVAIMTELIEARHEKGFSQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKL

Nucleotide


Download         Length: 294 bp        

>NTDB_id=1131763 H1X38_RS03575 WP_002890617.1 674398..674691(+) (HI0659) [Streptococcus thermophilus isolate STH_CIRM_1051]
ATGAAGAATAGTGCCATCGGCAGCAATTGGAAAGATGTGAGAGCAGAGCTCTTCACAAAGGAAGAAATCCTGGAAAGTGA
TCTGCGGGTCGCGATTATGACGGAGCTAATCGAGGCTCGGCATGAAAAGGGCTTTAGCCAAAAGAAACTAGAAGAACTCA
GTGGGGTCAGTCAACCGGTCATCGCTCGGATGGAGACGGGAAAGACCAGTCCTCAATTGGACACGGTCTTGAAAGTCTTA
GCCAGTCTGGGCAAGACCCTTGCTGTCGTCCCACTGGAACAAGAAAAGCTCTAA

Domains


Predicted by InterproScan.

(37-88)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB J7TXL7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557


Multiple sequence alignment