Detailed information NTG0113174

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: M876_RS17390
• Genome accession: NZ_CP006576
• Coordinates: 3831820..3832929 (-)
• Length: 369 a.a.
• NCBI ID: WP_047034524.1
• Uniprot ID: -
• Organism: Elizabethkingia anophelis FMS-007
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3826820..3837929

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M876_RS17365 (M876_17840)	-	3828083..3828814 (+)	732	WP_047034522.1	DNA alkylation repair protein	-
M876_RS17370 (M876_17845)	-	3828811..3829191 (-)	381	WP_047034523.1	group III truncated hemoglobin	-
M876_RS17375 (M876_17850)	-	3829288..3829779 (+)	492	WP_021347638.1	YkgJ family cysteine cluster protein	-
M876_RS17380 (M876_17855)	-	3829906..3830181 (+)	276	WP_021347639.1	hypothetical protein	-
M876_RS17385 (M876_17860)	gdhA	3830270..3831634 (-)	1365	WP_009086437.1	NADP-specific glutamate dehydrogenase	-
M876_RS17390 (M876_17865)	dprA	3831820..3832929 (-)	1110	WP_047034524.1	DNA-processing protein DprA	Machinery gene
M876_RS17395 (M876_17870)	-	3832967..3833734 (-)	768	WP_009086441.1	rhomboid family intramembrane serine protease	-
M876_RS17400 (M876_17875)	-	3833902..3835023 (+)	1122	WP_009086443.1	DUF3078 domain-containing protein	-
M876_RS17405 (M876_17880)	-	3835030..3835869 (-)	840	WP_080958228.1	YifB family Mg chelatase-like AAA ATPase	-
M876_RS17410 (M876_17885)	-	3836242..3837516 (+)	1275	WP_047034525.1	BT4734/BF3469 family protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41244.24 Da
• Isoelectric Point: 7.4791

>NTDB_id=113174 M876_RS17390 WP_047034524.1 3831820..3832929(-) (dprA) [Elizabethkingia anophelis FMS-007]
MFSKEHLYSIALRHCPQIGDLHFKKIVTTIGSAKEAWSLPRRELVKLYGIGNKIVEDIGKDSHLQFAERELEFCYKNNIQ
ILLSHQGNFPELLYQCDDTPAILYQKGKFDHHRTNISIVGTRKNSKYGKEFITEFLYSLKDNNIQTISGLAIGTDTCAHE
ESLKNNIPTTAILAHGFHILYPNTNRKLADKLLENGGCLFTEFNSSQPPIRESFIQRNRIIAGISPSTIITETAYGGGSV
STANFASIYNREVLALPGSVNDKYSQGCNLLISQNKARIIVSISDTIDYLGLVTKPVEQLPLFHKKEILASLTSDQQLIL
SAITDSPNINPDEIAEKVSLPIYKILPIILDLELLGYIKASSGRQYFPS

Nucleotide

• Length: 1110 bp

>NTDB_id=113174 M876_RS17390 WP_047034524.1 3831820..3832929(-) (dprA) [Elizabethkingia anophelis FMS-007]
ATGTTTTCCAAAGAACATCTTTATTCTATAGCACTAAGACATTGCCCGCAAATCGGTGATTTACACTTCAAGAAAATAGT
TACCACAATTGGTTCAGCAAAAGAAGCTTGGAGCCTTCCCCGACGTGAACTTGTCAAATTGTATGGTATCGGAAACAAAA
TAGTGGAAGACATAGGGAAAGATTCCCATTTACAATTTGCAGAAAGAGAACTAGAGTTCTGCTATAAGAATAACATTCAG
ATCCTACTTTCTCATCAGGGAAATTTCCCGGAATTACTATATCAGTGTGATGACACACCAGCTATACTCTATCAGAAAGG
AAAATTTGACCACCACAGGACAAATATTAGTATAGTAGGTACAAGGAAAAATTCGAAGTACGGAAAAGAGTTTATTACCG
AATTTCTGTATTCTCTAAAAGATAACAATATCCAGACAATTAGCGGACTCGCTATTGGTACAGATACTTGCGCACATGAA
GAATCTCTAAAAAACAATATTCCGACAACTGCAATACTCGCACATGGTTTTCATATACTGTATCCCAATACAAACAGAAA
GTTAGCCGACAAATTATTGGAAAATGGAGGATGCCTTTTTACTGAATTCAATTCATCACAGCCACCGATAAGAGAAAGCT
TTATCCAAAGAAACAGAATTATTGCTGGTATATCGCCCTCCACAATCATAACAGAAACGGCTTATGGCGGAGGATCTGTA
AGTACAGCCAACTTTGCCAGCATATATAACCGCGAAGTACTTGCGCTCCCAGGCTCTGTCAATGACAAATACAGCCAAGG
CTGCAACCTTTTAATTTCGCAAAACAAAGCAAGAATTATCGTTTCCATTTCTGACACGATTGACTATCTGGGTCTTGTTA
CCAAGCCTGTGGAACAGCTCCCCTTATTCCATAAAAAAGAAATCCTTGCGAGCCTTACATCAGACCAACAACTGATTCTA
TCCGCTATTACGGATTCCCCTAACATAAATCCTGATGAAATTGCCGAAAAAGTTTCTCTCCCCATTTACAAAATTCTTCC
CATAATATTGGATCTGGAACTTTTAGGGTACATTAAAGCCTCTTCCGGGAGACAATATTTCCCAAGCTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-280)

• DprA winged helix domain (DprA_WH) (309-363)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	51.639	99.187	0.512