Detailed information NTG1131653

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H1W90_RS06820
• Genome accession: NZ_LR822033
• Coordinates: 1322268..1323194 (-)
• Length: 308 a.a.
• NCBI ID: WP_002946409.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_1048
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1317268..1328194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1W90_RS06790 (STHERMO_1517)	-	1317346..1318140 (-)	795	WP_180481058.1	HAD hydrolase family protein	-
H1W90_RS06795 (STHERMO_1518)	-	1318324..1318701 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
H1W90_RS06800 (STHERMO_1519)	-	1318706..1319404 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
H1W90_RS06805 (STHERMO_1520)	-	1319416..1320201 (+)	786	WP_176243303.1	ABC transporter permease	-
H1W90_RS06810 (STHERMO_1521)	amiF	1320251..1321180 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
H1W90_RS06815 (STHERMO_1522)	amiE	1321173..1322258 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
H1W90_RS06820 (STHERMO_1523)	amiD	1322268..1323194 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
H1W90_RS06825 (STHERMO_1524)	amiC	1323194..1324687 (-)	1494	WP_002946410.1	ABC transporter permease	Regulator
H1W90_RS06830 (STHERMO_1525)	amiA	1324749..1326716 (-)	1968	WP_180481059.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34694.85 Da
• Isoelectric Point: 9.7054

>NTDB_id=1131653 H1W90_RS06820 WP_002946409.1 1322268..1323194(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_1048]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1131653 H1W90_RS06820 WP_002946409.1 1322268..1323194(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_1048]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGATTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	100	100	1
amiD	Streptococcus thermophilus LMD-9	100	100	1
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964