Detailed information NTG1131474

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H1W95_RS06800
• Genome accession: NZ_LR822030
• Coordinates: 1328167..1329093 (-)
• Length: 308 a.a.
• NCBI ID: WP_084828982.1
• Uniprot ID: A0A0E2Q2N6
• Organism: Streptococcus thermophilus isolate STH_CIRM_1046
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1323167..1334093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1W95_RS06770 (STHERMO_1524)	-	1323244..1324038 (-)	795	WP_011681412.1	HAD-IIB family hydrolase	-
H1W95_RS06775 (STHERMO_1525)	-	1324223..1324600 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
H1W95_RS06780 (STHERMO_1526)	-	1324605..1325303 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
H1W95_RS06785 (STHERMO_1527)	-	1325315..1326100 (+)	786	WP_011681414.1	hypothetical protein	-
H1W95_RS06790 (STHERMO_1528)	amiF	1326150..1327079 (-)	930	WP_082245810.1	ATP-binding cassette domain-containing protein	Regulator
H1W95_RS06795 (STHERMO_1529)	amiE	1327072..1328157 (-)	1086	WP_084828981.1	ABC transporter ATP-binding protein	Regulator
H1W95_RS06800 (STHERMO_1530)	amiD	1328167..1329093 (-)	927	WP_084828982.1	oligopeptide ABC transporter permease OppC	Regulator
H1W95_RS06805 (STHERMO_1531)	amiC	1329093..1330586 (-)	1494	WP_180483348.1	ABC transporter permease	Regulator
H1W95_RS06810 (STHERMO_1532)	amiA	1330648..1332615 (-)	1968	WP_180483350.1	peptide ABC transporter substrate-binding protein	Regulator
H1W95_RS06815	-	1332819..1333009 (-)	191	Protein_1301	IS3 family transposase	-
H1W95_RS10270 (STHERMO_1533)	-	1333003..1333413 (-)	411	Protein_1302	ATP-binding cassette domain-containing protein	-
H1W95_RS10275 (STHERMO_1534)	-	1333445..1333758 (-)	314	Protein_1303	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34664.83 Da
• Isoelectric Point: 9.7054

>NTDB_id=1131474 H1W95_RS06800 WP_084828982.1 1328167..1329093(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_1046]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIIGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1131474 H1W95_RS06800 WP_084828982.1 1328167..1329093(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_1046]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAATGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCTCTCTTTATTA
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

3D structure

• AlphaFold DB: A0A0E2Q2N6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.026	100	0.99
amiD	Streptococcus thermophilus LMD-9	99.026	100	0.99
amiD	Streptococcus salivarius strain HSISS4	96.104	100	0.961