Detailed information
Bioinformatically predicted
Overview
| Name | endA | Type | Machinery gene |
| Locus tag | H1W95_RS05365 | Genome accession | NZ_LR822030 |
| Coordinates | 1038978..1039859 (-) | Length | 293 a.a. |
| NCBI ID | WP_180483255.1 | Uniprot ID | A0AAU9H7G4 |
| Organism | Streptococcus thermophilus isolate STH_CIRM_1046 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1033978..1044859
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1W95_RS05340 (STHERMO_1188) | vicR | 1034682..1035389 (-) | 708 | WP_011681206.1 | response regulator YycF | Regulator |
| H1W95_RS05345 (STHERMO_1189) | - | 1035916..1036683 (+) | 768 | WP_011681207.1 | amino acid ABC transporter ATP-binding protein | - |
| H1W95_RS05350 (STHERMO_1190) | - | 1036695..1037528 (+) | 834 | WP_022096756.1 | transporter substrate-binding domain-containing protein | - |
| H1W95_RS05355 (STHERMO_1191) | - | 1037546..1038244 (+) | 699 | WP_014608374.1 | amino acid ABC transporter permease | - |
| H1W95_RS05360 (STHERMO_1192) | - | 1038256..1038906 (+) | 651 | WP_014608375.1 | amino acid ABC transporter permease | - |
| H1W95_RS05365 (STHERMO_1193) | endA | 1038978..1039859 (-) | 882 | WP_180483255.1 | DNA/RNA non-specific endonuclease | Machinery gene |
| H1W95_RS05370 (STHERMO_1194) | - | 1039921..1040109 (-) | 189 | WP_011226090.1 | DNA-directed RNA polymerase subunit beta | - |
| H1W95_RS05375 (STHERMO_1195) | murA | 1040111..1041382 (-) | 1272 | WP_014608377.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| H1W95_RS05380 (STHERMO_1196) | - | 1041452..1041688 (-) | 237 | WP_002946959.1 | DUF1146 family protein | - |
| H1W95_RS05385 (STHERMO_1197) | galE | 1041876..1042889 (-) | 1014 | WP_014727437.1 | UDP-glucose 4-epimerase GalE | - |
| H1W95_RS05390 (STHERMO_1198) | - | 1042904..1043407 (-) | 504 | WP_224102963.1 | DUF4832 domain-containing protein | - |
| H1W95_RS05395 (STHERMO_1199) | - | 1043397..1043849 (-) | 453 | WP_011681214.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 293 a.a. Molecular weight: 31816.52 Da Isoelectric Point: 10.0477
>NTDB_id=1131468 H1W95_RS05365 WP_180483255.1 1038978..1039859(-) (endA) [Streptococcus thermophilus isolate STH_CIRM_1046]
MVERKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLLRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN
MVERKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLLRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN
Nucleotide
Download Length: 882 bp
>NTDB_id=1131468 H1W95_RS05365 WP_180483255.1 1038978..1039859(-) (endA) [Streptococcus thermophilus isolate STH_CIRM_1046]
ATGGTAGAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTAATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGACGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTATTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA
ATGGTAGAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTAATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGACGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTATTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| endA | Streptococcus pneumoniae Rx1 |
72.385 |
81.57 |
0.59 |
| endA | Streptococcus pneumoniae D39 |
72.385 |
81.57 |
0.59 |
| endA | Streptococcus pneumoniae R6 |
72.385 |
81.57 |
0.59 |
| endA | Streptococcus pneumoniae TIGR4 |
72.385 |
81.57 |
0.59 |